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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CCCTGAGCTC

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Code
SAGE_Colon_adenocarcinoma_CL_Caco260682619   
SAGE_Kidney_embryonic_CL_293-control41955419   
SAGE_Colon_adenocarcinoma_CL_HCT11655641517   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Brain_fetal_normal_B_S13055461711   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765411   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688054611   
SAGE_Ovary_adenocarcinoma_B_OVT-753514311   
SAGE_Brain_normal_cortex_B_BB54294233510   
SAGE_Brain_normal_cerebellum_B_BB5424050029   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_B_pool26603439   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021338   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110198   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357737   
SAGE_Retina_macula_normal_B_HMAC210241747   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Brain_ependymoma_B_R102312269046   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H14136185326   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620396   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173556   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216026   
SAGE_Prostate_normal_B_26405826   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842232974   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938454   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217054   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535354   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923254   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Skin_Melanoma_B_hs02754128221874   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274313   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Lymph_node_Lymphoma_B_hs02045178993983   
SAGE_Muscle_normal_B_young5394713   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Melanoma_B_hs02743895211663   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901163   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Vein_normal_B_hs023761356881003   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Eye_Retinoblastoma_B_hs0389124342321472   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Vein_normal_B_hs02306755622852   
SAGE_Bladder_Cancer_B_hs02664244612361   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604361   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960471   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568311   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864671   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161481   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Bladder_Cancer_B_hs0240621642630   
SAGE_Bladder_Cancer_B_hs0264583396830   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003740   
SAGE_Bone_Marrow_Normal_FS_hs04044842547100   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741030   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091010   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875590   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124010   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143220   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083120   
SAGE_Skin_Cancer_B_hs02795703298170   
SAGE_Skin_Cancer_B_hs0284389250730   
SAGE_Skin_Melanoma_B_hs02733881770100   
SAGE_Skin_Melanoma_B_hs02765631800240   
SAGE_Skin_Normal_B_hs0271580768640   
SAGE_Skin_Normal_B_hs0272439755050   
SAGE_Skin_Normal_B_hs02775269789170   
SAGE_Skin_Normal_B_hs02783042221130   
SAGE_Skin_Normal_B_hs0281651708990   
SAGE_Skin_Normal_B_hs02824411636140   
SAGE_Uterus_Normal_B_hs01946452623110   
SAGE_Uterus_normal_B_hs01953718463110