Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CCCCAAGACA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170439108   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691847   
SAGE_Breast_normal_epithelium_CD44+_AP_N2560081346   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L1518721246   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15639941340   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430838   
SAGE_White_Blood_Cells_monocytes_normal_AP_P2544261036   
SAGE_Breast_normal_epithelium_MUC1+_AP_N5762271334   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N5761731334   
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016561733   
SAGE_Brain_glioblastoma_hypoxia_CL_H247717651130   
SAGE_Lymph_Node_Lymphoma_B_1720081130   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132727   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP787851025   
SAGE_GallBladder_Adenocarcinoma_B_NAM01785481025   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091824   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987861122   
SAGE_Breast_carcinoma_B_BWHT18_DCIS50701519   
SAGE_Ovary_adenocarcinoma_B_OVT-641443419   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634519   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147718   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344217   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656829715   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520515   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478415   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759615   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158815   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P250297415   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049414   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Breast_normal_epithelium_CD44+_AP_N580464614   
SAGE_Breast_normal_myoepithelium_CL_HME5055516414   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684841614   
SAGE_Prostate_carcinoma_CL_PC3_AS240768314   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539412   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729312   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Ovary_carcinoma_CL_ES2-131159212   
SAGE_Pancreas_carcinoma_CL_ASPC31224212   
SAGE_Stomach_adenocarcinoma_B_G23464925412   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Lung_adenocarcinoma_MD_L1086887511   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Ovary_adenocarcinoma_B_OVT-753514311   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577511   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660423310   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875523110   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956310   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151939   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209602259   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593539   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Lung_normal_CL_L154222629   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287359   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493748   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918448   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341038   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802138   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110198   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465118   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Skin_Normal_B_hs028244116361788   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039837   
SAGE_Esophagus_Normal_B_CN017563437   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Ovary_endometriosis_CL_E127609737   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726237   
SAGE_Vascular_normal_CS_control5164227   
SAGE_Vein_normal_B_hs023067556222677   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002926   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Embryo_Pre-Cancer_B_hs032468930162096   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821476   
SAGE_Lung_normal_CL_L162898316   
SAGE_Muscle_Rhabdomyosarcoma_B_16127026   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617626   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_Brain_glioblastoma_CL_28d11062435   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468802475   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775725   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432125   
SAGE_Foreskin_normal_B_hs030539403501005   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Skin_Melanoma_B_hs027541282211105   
SAGE_Skin_Melanoma_B_hs027656318001525   
SAGE_Skin_Normal_B_hs027752697891335   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Bladder_Cancer_B_hs026458339681174   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642524   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923254   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051544   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Skin_Normal_B_hs02783042221764   
SAGE_Skin_Normal_B_hs028165170891454   
SAGE_Bladder_Cancer_B_hs02654640198833   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842232633   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274293   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Muscle_normal_B_old5388913   
SAGE_Muscle_normal_B_young5394713   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Cancer_B_hs02843892507713   
SAGE_Skin_Melanoma_B_hs02743895211773   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vein_normal_B_hs023761356881143   
SAGE_Bladder_Cancer_B_hs02664244612452   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938262   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Skin_Cancer_B_hs02833692239542   
SAGE_Skin_Normal_B_hs02724397550622   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490692   
SAGE_Uterus_Normal_B_hs01946452623882   
SAGE_Uterus_normal_B_hs01953718463532   
SAGE_Bladder_Cancer_B_hs02406216426411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166821   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs02045178993461   
SAGE_Skin_Cancer_B_hs02803618498341   
SAGE_Skin_Melanoma_B_hs02733881770361   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Urothelium_normal_B_hs02393114307211   
SAGE_Bladder_Cancer_B_hs0241333580120   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003720   
SAGE_Bone_Marrow_Normal_FS_hs0404484254740   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741010   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124010   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608340   
SAGE_Eye_Retinoblastoma_B_hs038912434232190   
SAGE_Lymph_node_Lymphoma_B_hs0196479148120   
SAGE_Skin_Normal_B_hs02715807686150   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161280