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Cancer Genome Characterization Initiative

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SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081742   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303318   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX088439818   
SAGE_Ovary_adenocarcinoma_B_OVT-753514518   
SAGE_Brain_glioblastoma_B_GBM106259762516   
SAGE_Lung_adenocarcinoma_B_136256316   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478415   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426414   
SAGE_Breast_metastatic_carcinoma_B_LN260343413   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701413   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158713   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785512   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398512   
SAGE_Pancreas_carcinoma_CL_ASPC31224212   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786612   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182141311   
SAGE_Vascular_normal_CS_control51642311   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_meningioma_grade_III_B_SF236659786310   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724651410   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Spinal_cord_normal_B_154785310   
SAGE_Vascular_normal_CS_VEGF+57316310   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082749   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652039   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE10205353109   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES9224488119   
SAGE_Lung_normal_CL_L154222629   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216039   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493748   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166898   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923298   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468803627   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013227   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775737   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110187   
SAGE_Heart_normal_B_18306337   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165647   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_glioblastoma_B_H1425C8899036   
SAGE_Brain_medulloblastoma_B_H14136185326   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Lung_normal_CL_L162898316   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Prostate_normal_B_26405826   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_ependymoma_B_H5806861425   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274465   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802125   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620385   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Ovary_endometriosis_CL_E127609725   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842232814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC14961014   
SAGE_Colon_normal_B_NC24847914   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_III_B_R14011873323   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_fetal_normal_B_S130554663   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173533   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143273   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Muscle_normal_B_young5394713   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410442   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002442   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938202   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765122   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_normal_B_18870812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Skin_Melanoma_B_hs02765631800592   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Bladder_Cancer_B_hs02406216426371   
SAGE_Bladder_Cancer_B_hs02645833968401   
SAGE_Bladder_Cancer_B_hs02654640198401   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037451   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604221   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960371   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755221   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs02045178993301   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848451   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705421   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Normal_B_hs02816517089381   
SAGE_Skin_Normal_B_hs02824411636411   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490581   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Vein_normal_B_hs02306755622521   
SAGE_Vein_normal_B_hs02376135688351   
SAGE_Bladder_Cancer_B_hs0241333580160   
SAGE_Bladder_Cancer_B_hs02664244612110   
SAGE_Bone_Marrow_Normal_FS_hs0404484254740   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091020   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568130   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240100   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864400   
SAGE_Embryo_Pre-Cancer_B_hs03246893016270   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608350   
SAGE_Eye_Retinoblastoma_B_hs038912434232330   
SAGE_Foreskin_normal_B_hs0305394035060   
SAGE_Lymph_node_Lymphoma_B_hs0196479148180   
SAGE_Skin_Cancer_B_hs02795703298180   
SAGE_Skin_Cancer_B_hs0280361849870   
SAGE_Skin_Cancer_B_hs0283369223940   
SAGE_Skin_Cancer_B_hs0284389250780   
SAGE_Skin_Melanoma_B_hs0273388177050   
SAGE_Skin_Melanoma_B_hs0274389521130   
SAGE_Skin_Melanoma_B_hs0275412822170   
SAGE_Skin_Normal_B_hs0271580768640   
SAGE_Skin_Normal_B_hs0272439755050   
SAGE_Skin_Normal_B_hs02775269789100   
SAGE_Skin_Normal_B_hs0278304222120   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161140   
SAGE_Urothelium_normal_B_hs0239311430720   
SAGE_Uterus_Normal_B_hs01946452623280   
SAGE_Uterus_normal_B_hs01953718463100