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Cancer Genome Characterization Initiative

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SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187228107   
SAGE_White_Blood_Cells_monocytes_normal_AP_P2544261866   
SAGE_Bone_marrow_normal_B_D01365771160   
SAGE_White_Blood_Cells_monocyte_normal_AP_A1999132550   
SAGE_Colon_adenocarcinoma_CL_HCT116556411346   
SAGE_Pancreas_carcinoma_CL_ASPC31224744   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987862244   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM0989622142   
SAGE_Brain_ependymoblastoma_B_81933975741   
SAGE_Pancreas_carcinoma_CL_PL4529557640   
SAGE_Ovary_carcinoma_CL_A278021369437   
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016561937   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081636   
SAGE_Lung_normal_B_1887081636   
SAGE_Stomach_carcinoma_B_G189630751134   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011581733   
SAGE_Colon_adenocarcinoma_CL_RKO51294831   
SAGE_Pancreas_normal_CS_H12632223531   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223183226   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014325426   
SAGE_Ovary_adenocarcinoma_B_OVT-831987425   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227422024   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600235223   
SAGE_Lung_adenocarcinoma_MD_L10868871023   
SAGE_Prostate_normal_MD_PR31759277723   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160722   
SAGE_Stomach_normal_B_antrum26653322   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880104621   
SAGE_Liver_cholangiocarcinoma_CL_K354842621   
SAGE_Stomach_normal_MD_14S73353821   
SAGE_Brain_meningioma_grade_III_B_SF236659786620   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX088439920   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551419   
SAGE_Kidney_embryonic_CL_293-control41955419   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029419   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641219   
SAGE_Uterus_Normal_B_hs0194645262363919   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N4810487659818   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182142018   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351418   
SAGE_Pancreas_adenocarcinoma_B_96-625233213318   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS666176618   
SAGE_Breast_carcinoma_B_IDC-368891617   
SAGE_Breast_normal_FS_NER34565317   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681817   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_Brain_glioblastoma_B_GBM106259762516   
SAGE_Brain_glioblastoma_B_H137149338416   
SAGE_Brain_medulloblastoma_CL_mhh-147858416   
SAGE_Brain_meningioma_grade_II_B_SF217648711416   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Brain_astrocyte_normal_CL_NHA551481415   
SAGE_Brain_medulloblastoma_B_127338614315   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS789184715   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762032115   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881715   
SAGE_Prostate_adenocarcinoma_MD_PR31764951515   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+81595614   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA97291714   
SAGE_Brain_astrocytoma_grade_III_B_82899939714   
SAGE_Brain_ependymoma_B_139456314414   
SAGE_Brain_ependymoma_B_R1023122690914   
SAGE_Brain_ependymoma_B_R51084073614   
SAGE_Brain_medulloblastoma_B_H87667404514   
SAGE_Brain_meningioma_grade_I_B_SF427169253514   
SAGE_Brain_normal_cerebellum_B_BB54240500314   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430314   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701514   
SAGE_Lung_normal_CL_L1542226314   
SAGE_Ovary_adenocarcinoma_B_OVT-641443314   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391613   
SAGE_Brain_glioblastoma_B_R336102322713   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Eye_lens_B_UIHI085898613   
SAGE_Vascular_endothelium_hemangioma_B_14675680513   
SAGE_Vascular_normal_CS_VEGF+57316413   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003731412   
SAGE_Brain_ependymoma_B_115062373412   
SAGE_Brain_medulloblastoma_B_H141361853412   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319712   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724651712   
SAGE_GallBladder_Adenocarcinoma_B_C0181380512   
SAGE_Leukocytes_normal_B_147873312   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_Stomach_adenocarcinoma_B_G23464925412   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759512   
SAGE_Brain_astrocytoma_grade_II_B_H359105764611   
SAGE_Brain_ependymoma_B_H58068614411   
SAGE_Brain_medulloblastoma_B_97-05-P01569971411   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK085944511   
SAGE_Liver_cholangiocarcinoma_CL_K452973311   
SAGE_Lung_adenocarcinoma_B_136256211   
SAGE_Peritoneum_normal_B_1353527311   
SAGE_Stomach_carcinoma_B_xenograft_X10169749411   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P250297311   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886610   
SAGE_Brain_astrocytoma_grade_II_B_H501128309710   
SAGE_Brain_ependymoma_B_R35373822410   
SAGE_Brain_glioblastoma_CL_4d115212610   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Brain_meningioma_grade_I_B_SF446554647310   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N4718909389910   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469410   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747210   
SAGE_Colon_adenocarcinoma_B_Tu10255700310   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548410   
SAGE_Ovary_endometriosis_CL_E1276097410   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Skin_Melanoma_B_hs0276563180030410   
SAGE_Stomach_adenocarcinoma_MD_HG793714510   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023310   
SAGE_Brain_astrocytoma_grade_III_B_34310015859   
SAGE_Brain_astrocytoma_grade_III_B_40710831259   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_astrocytoma_grade_III_B_58410300859   
SAGE_Brain_ependymoma_B_R62812043169   
SAGE_Brain_fetal_normal_B_S1305546149   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_glioblastoma_B_H83310060059   
SAGE_Brain_glioblastoma_B_R2010105359   
SAGE_Brain_medulloblastoma_B_98-04-P4944306829   
SAGE_Brain_medulloblastoma_B_DL58367149   
SAGE_Brain_medulloblastoma_B_H3066045439   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509139   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353939   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652039   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986259   
SAGE_Colon_adenocarcinoma_CL_Caco26068239   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101109   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831699   
SAGE_Skin_Cancer_B_hs027957032982849   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902779   
SAGE_Thyroid_follicular_adenoma_B_TT00510157859   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690838   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_medulloblastoma_B_DL76839238   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Brain_normal_leptomeninges_B_AL27247338   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396738   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Prostate_normal_epithelium_CS_senescent7171738   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Thyroid_normal_B_00111593858   
SAGE_Uterus_normal_B_hs019537184631508   
SAGE_Brain_ependymoma_B_R4555182527   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_normal_peds_cortex_B_H15717755437   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078643927   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013227   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514737   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501937   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039837   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535387   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923287   
SAGE_Esophagus_Normal_B_CN017563437   
SAGE_Lymph_node_Lymphoma_B_hs020451789931967   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612367   
SAGE_Universal_reference_human_RNA_CL5172927   
SAGE_Vascular_normal_CS_control5164227   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_normal_cortex_B_pool66245126   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601616   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101236   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Muscle_Rhabdomyosarcoma_B_16127026   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_normal_B_26405826   
SAGE_Retina_Peripheral_normal_B_15966126   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019936   
SAGE_Skin_Normal_B_hs028165170892126   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Bone_Marrow_Normal_FS_hs040448425471385   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_II_B_H12711448935   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101195   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802425   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878525   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900625   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Retina_Peripheral_normal_B_210531235   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Bladder_Cancer_B_hs024062164261404   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240764   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Heart_normal_B_18306324   
SAGE_Kidney_normal_B_14099314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051424   
SAGE_Placenta_first_trimester_normal_B_18926524   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_Normal_B_hs02824411636954   
SAGE_Vein_normal_B_hs023067556221634   
SAGE_Bladder_Cancer_B_hs02664244612763   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604783   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755643   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Liver_normal_B_16630813   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481073   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Cancer_B_hs02803618498713   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vein_normal_B_hs023761356881083   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Eye_Retinoblastoma_B_hs0389124342321392   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Normal_B_hs02724397550652   
SAGE_Skin_Normal_B_hs02775269789532   
SAGE_Bladder_Cancer_B_hs02413335801251   
SAGE_Bladder_Cancer_B_hs02645833968551   
SAGE_Bladder_Cancer_B_hs02654640198441   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568201   
SAGE_Foreskin_normal_B_hs03053940350251   
SAGE_Lymph_node_Lymphoma_B_hs01964791481371   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02833692239261   
SAGE_Skin_Cancer_B_hs02843892507351   
SAGE_Skin_Melanoma_B_hs02754128221301   
SAGE_Skin_Normal_B_hs02715807686561   
SAGE_Skin_Normal_B_hs02783042221261   
SAGE_Urothelium_normal_B_hs02393114307161   
SAGE_Embryo_Pre-Cancer_B_hs03246893016140   
SAGE_Skin_Melanoma_B_hs0273388177090   
SAGE_Skin_Melanoma_B_hs02743895211120