Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CAGGGCCTGA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_normal_epithelium_MUC1+_AP_N15717041850   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691744   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N5761731642   
SAGE_Breast_normal_epithelium_MUC1+_AP_N5762271436   
SAGE_Lung_adenocarcinoma_B_136256633   
SAGE_Breast_normal_epithelium_CD44+_AP_N5804641332   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634830   
SAGE_Fibroblasts_CL_postcrisis21833327   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303424   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410924   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011581223   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080622   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785922   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880104721   
SAGE_Ovary_normal_CL_IOSE29EC-1147159521   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052419   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935618   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147718   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N1563994618   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531918   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985318   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956517   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786816   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227413915   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132415   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781415   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512415   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881715   
SAGE_Esophagus_Dysplasia_B_HGD0278611615   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548615   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759615   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223101814   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N4810487657414   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008414   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913714   
SAGE_Esophagus_Dysplasia_B_LGD0174904513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168412   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729312   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322512   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093810611   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS751993311   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478311   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Breast_normal_stroma_B_IDC850485311   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399211   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426311   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600215510   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757410   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053410   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284410   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082749   
SAGE_Brain_glioblastoma_CL_28d11062459   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509139   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101109   
SAGE_GallBladder_Adenocarcinoma_B_C018138049   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531439   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078644518   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918448   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821498   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Stomach_adenocarcinoma_MD_HG79371448   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159537   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901537   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165647   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_Medulloblastoma_CL_425C26264226   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Breast_carcinoma_B_DCIS-46060526   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620396   
SAGE_Lung_normal_CL_L162898316   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_normal_B_26405826   
SAGE_Retina_Peripheral_normal_B_4Peri12669146   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617626   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_fetal_normal_B_S130554695   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501925   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802125   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246585   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166854   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923254   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Lung_normal_CL_L154222614   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357724   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019924   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901194   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604713   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217043   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755542   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_GallBladder_Normal_B_HN8570612   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_node_Lymphoma_B_hs02045178993692   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848662   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960431   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568371   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705381   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161341   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs0264583396850   
SAGE_Bladder_Cancer_B_hs0265464019870   
SAGE_Embryo_Pre-Cancer_B_hs0324689301660   
SAGE_Foreskin_normal_B_hs0305394035040   
SAGE_Lymph_node_Lymphoma_B_hs0196479148130   
SAGE_Skin_Cancer_B_hs0279570329820   
SAGE_Skin_Melanoma_B_hs0275412822130   
SAGE_Skin_Melanoma_B_hs02765631800100   
SAGE_Skin_Normal_B_hs02775269789110   
SAGE_Skin_Normal_B_hs0278304222150   
SAGE_Uterus_Normal_B_hs01946452623230   
SAGE_Uterus_normal_B_hs0195371846360