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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ATGTTAGATA

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Code
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608352128   
SAGE_Eye_Retinoblastoma_B_hs038912434232175028   
SAGE_Bladder_Cancer_B_hs0264583396842814   
SAGE_Ovary_carcinoma_CL_ES2-131159212   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549036612   
SAGE_Universal_reference_human_RNA_CL51729311   
SAGE_Brain_glioblastoma_CL_4d115212610   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016132210   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Lymph_node_Lymphoma_B_hs019647914812329   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Brain_glioblastoma_CL_28d11062447   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821487   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432167   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Prostate_normal_B_26405826   
SAGE_Skin_Melanoma_B_hs027541282211326   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166865   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110165   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481465   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Prostate_normal_epithelium_CS_confluent7189725   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217054   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Lung_normal_CL_L154222614   
SAGE_Lymph_node_Lymphoma_B_hs020451789931094   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Melanoma_B_hs02743895211864   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Bladder_Cancer_B_hs02413335801583   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755763   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620353   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173533   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Skin_Melanoma_B_hs02733881770693   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vein_normal_B_hs023067556221303   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02654640198652   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604502   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Skin_Cancer_B_hs02833692239392   
SAGE_Skin_Cancer_B_hs02843892507462   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vein_normal_B_hs02376135688862   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02406216426431   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_fetal_normal_B_S130554621   
SAGE_Embryo_Pre-Cancer_B_hs03246893016581   
SAGE_Foreskin_normal_B_hs03053940350251   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705511   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Normal_B_hs02715807686411   
SAGE_Skin_Normal_B_hs02724397550351   
SAGE_Skin_Normal_B_hs02775269789481   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Urothelium_normal_B_hs02393114307191   
SAGE_Bladder_Cancer_B_hs02664244612110   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960200   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741030   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091030   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568150   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124080   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600210   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227410   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Skin_Cancer_B_hs02795703298220   
SAGE_Skin_Cancer_B_hs02803618498150   
SAGE_Skin_Melanoma_B_hs0276563180090   
SAGE_Skin_Normal_B_hs02783042221150   
SAGE_Skin_Normal_B_hs02816517089170   
SAGE_Skin_Normal_B_hs0282441163690   
SAGE_Uterus_Normal_B_hs0194645262350   
SAGE_Uterus_normal_B_hs01953718463110