Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ATCCTGAGTT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS666176120362   
SAGE_Breast_carcinoma_CL_MDA435H484032356277   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873131254   
SAGE_Breast_carcinoma_CL_MDA435C4727054228   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187256215   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC4033812403143185   
SAGE_Lymph_node_Lymphoma_B_hs020451789934209162   
SAGE_Breast_carcinoma_CL_MDA435H244663135150   
SAGE_Brain_glioblastoma_B_H1425C8899058130   
SAGE_Breast_carcinoma_B_IDC-56045132105   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029726103   
SAGE_Lung_normal_B_18870845101   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC7343991798   
SAGE_Skin_Normal_B_hs02724397550190986   
SAGE_Breast_carcinoma_B_CT15_IDC21840982   
SAGE_Breast_carcinoma_MD_DCIS407831678   
SAGE_Breast_carcinoma_associated_stroma_B_IDC7680242676   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS6570492173   
SAGE_Lung_adenocarcinoma_MD_L10868873171   
SAGE_Lung_adenocarcinoma_MD_L9359161266   
SAGE_Brain_meningioma_grade_II_B_SF3622448571462   
SAGE_Breast_carcinoma_metastasis_B_2497941560   
SAGE_Breast_carcinoma_B_DCIS-4606051859   
SAGE_Stomach_adenocarcinoma_MD_G329468021459   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011583059   
SAGE_Breast_normal_organoid_B581811655   
SAGE_Skin_normal_B_NS366151054   
SAGE_Breast_metastatic_carcinoma_B_LN1450871253   
SAGE_Brain_glioblastoma_B_H1371493381352   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC7690061852   
SAGE_Vascular_endothelium_hemangioma_B_146756802052   
SAGE_Brain_glioblastoma_CS_TA2466781251   
SAGE_White_Blood_Cells_monocytes_normal_AP_P2544261451   
SAGE_Breast_carcinoma_B_95-25939364945   
SAGE_Ovary_adenocarcinoma_B_OVT-7535141244   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC8739671643   
SAGE_Lymph_node_Lymphoma_B_hs01964791481105143   
SAGE_Skin_Cancer_B_hs0280361849875541   
SAGE_Stomach_adenocarcinoma_MD_HS29588311137   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985637   
SAGE_Bladder_Cancer_B_hs0265464019884236   
SAGE_Pancreas_adenocarcinoma_B_96-625233213636   
SAGE_Brain_glioblastoma_B_H13531248052235   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246642235   
SAGE_Stomach_carcinoma_B_G189630751134   
SAGE_Brain_astrocytoma_grade_III_B_4391078241833   
SAGE_Prostate_adenocarcinoma_MD_PR317649511133   
SAGE_Prostate_normal_MD_PR317592771033   
SAGE_Bone_marrow_normal_B_D0136577632   
SAGE_Brain_meningioma_grade_II_B_SF217648711832   
SAGE_Breast_normal_stroma_AP_1791521332   
SAGE_Skin_Melanoma_B_hs0276563180090232   
SAGE_Thyroid_normal_B_0011159381932   
SAGE_Brain_astrocytoma_grade_II_B_H563885681431   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575930   
SAGE_Peritoneum_mesothelioma_B_1232529530   
SAGE_Breast_carcinoma_B_95-347670701029   
SAGE_Leukocytes_normal_B_147873729   
SAGE_White_Blood_Cells_monocyte_normal_AP_A1999131428   
SAGE_Breast_carcinoma_B_DCIS-543098627   
SAGE_Brain_glioblastoma_B_H111068986926   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342726   
SAGE_Retina_Peripheral_normal_B_159661826   
SAGE_Brain_glioblastoma_B_H8331006001325   
SAGE_Breast_normal_B_gestational hyperplasia161704825   
SAGE_Liver_cholangiocarcinoma_CL_K354842725   
SAGE_Skin_Normal_B_hs0271580768674925   
SAGE_Skin_Normal_B_hs0281651708982025   
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016561325   
SAGE_Brain_astrocytoma_grade_III_B_H272960591224   
SAGE_Breast_normal_epithelium_CD44+_AP_N5804641024   
SAGE_Brain_ependymoma_B_H58068614823   
SAGE_Breast_carcinoma_B_IDC-368891823   
SAGE_Breast_metastatic_carcinoma_B_LN260343723   
SAGE_GallBladder_Normal_B_HN857061023   
SAGE_Peritoneum_normal_B_1353527622   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331321   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441120   
SAGE_Brain_meningioma_grade_III_B_SF236659786620   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-357402620   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970564320   
SAGE_Brain_ependymoma_B_R58252189519   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512519   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634519   
SAGE_Brain_ependymoma_B_R6281204311118   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091618   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539618   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Brain_ependymoma_B_139456314517   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548717   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391716   
SAGE_Brain_normal_leptomeninges_B_AL272473616   
SAGE_Colon_adenocarcinoma_CL_SW83761148516   
SAGE_Lymph_Node_Lymphoma_B_172008616   
SAGE_Skin_Cancer_B_hs0284389250731716   
SAGE_Skin_Melanoma_B_hs0275412822134116   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786816   
SAGE_Brain_astrocytoma_grade_II_B_H127114489915   
SAGE_Liver_cholangiocarcinoma_CL_K452973415   
SAGE_Skin_Cancer_B_hs0279570329844015   
SAGE_Stomach_adenocarcinoma_B_G23464925515   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Breast_carcinoma_MD_LCIS67834514   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988514   
SAGE_Kidney_normal_B_140993314   
SAGE_Ovary_adenocarcinoma_B_OVT-641443314   
SAGE_Spinal_cord_normal_B_154785414   
SAGE_Stomach_adenocarcinoma_MD_HG793714714   
SAGE_Brain_astrocytoma_grade_III_B_343100158713   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877413   
SAGE_Skin_Cancer_B_hs0283369223924113   
SAGE_Stomach_normal_MD_14S73353513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168412   
SAGE_Liver_cholangiocarcinoma_B_K2D46853312   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Brain_astrocytoma_grade_III_B_407108312611   
SAGE_Brain_astrocytoma_grade_III_B_H102051573311   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Breast_normal_stroma_B_IDC850485311   
SAGE_Kidney_carcinoma_B_D2100281611   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Skin_Melanoma_B_hs0274389521122511   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795311   
SAGE_Brain_glioblastoma_B_R7099099510   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857410   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410410   
SAGE_Skin_Normal_B_hs0277526978926610   
SAGE_Uterus_normal_B_hs0195371846319210   
SAGE_Brain_astrocytoma_grade_III_B_H105510988659   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_astrocytoma_grade_II_B_H50112830969   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652039   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593539   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_GallBladder_Adenocarcinoma_B_C018138049   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531439   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918448   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379338   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Skin_Melanoma_B_hs027338817701748   
SAGE_Skin_Normal_B_hs028244116361988   
SAGE_Bladder_Cancer_B_hs026642446121627   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371777   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_III_B_H97010698247   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_medulloblastoma_B_H9728537637   
SAGE_Brain_meningioma_grade_I_B_SF44655464727   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Foreskin_normal_B_hs030539403501427   
SAGE_Heart_normal_B_18306337   
SAGE_Muscle_normal_B_old5388927   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Bladder_Cancer_B_hs024062164262076   
SAGE_Bladder_Cancer_B_hs026458339681806   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151926   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101166   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_normal_B_26405826   
SAGE_Brain_astrocytoma_grade_II_B_H38810628535   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101115   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_ependymoma_B_R102312269034   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755944   
SAGE_Colon_normal_B_NC14961014   
SAGE_Lung_normal_CL_L154222614   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Normal_B_hs02783042221614   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Muscle_normal_B_young5394713   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Bone_Marrow_Normal_FS_hs04044842547692   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604522   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Embryo_Pre-Cancer_B_hs03246893016742   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960341   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864921   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Eye_Retinoblastoma_B_hs0389124342321061   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848571   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Urothelium_normal_B_hs02393114307191   
SAGE_Uterus_Normal_B_hs01946452623531   
SAGE_Bladder_Cancer_B_hs0241333580180   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568120   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688010   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223150   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002110   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227450   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143220   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083110   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549080   
SAGE_Vein_normal_B_hs0237613568820