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Cancer Genome Characterization Initiative

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SAGE_Kidney_embryonic_CL_293+beta-catenin235191085   
SAGE_Brain_medulloblastoma_B_98-13-P301453421566   
SAGE_Retina_Retinoblastoma_B_1884902965   
SAGE_Brain_medulloblastoma_B_H972853762558   
SAGE_Brain_glioblastoma_CL_28d1106243156   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA972912551   
SAGE_Brain_medulloblastoma_B_H1413618531651   
SAGE_Brain_medulloblastoma_CL_4-HCR665991648   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092325148   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517353647   
SAGE_Brain_Medulloblastoma_CL_UW228-N949372246   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091083346   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361945   
SAGE_Stomach_carcinoma_B_G189630751444   
SAGE_Brain_medulloblastoma_B_H484574691241   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016684241   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121704441   
SAGE_Breast_normal_epithelium_CD44+_AP_N2560081139   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161127139   
SAGE_Bladder_Cancer_B_hs02645833968111238   
SAGE_Brain_medulloblastoma_B_98-05-P040892581738   
SAGE_Kidney_embryonic_CL_293-control41955838   
SAGE_Universal_reference_human_RNA_CL517291038   
SAGE_Brain_glioblastoma_CL_4d1152122034   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053533433   
SAGE_Brain_medulloblastoma_B_H876674041132   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb669881132   
SAGE_Brain_Medulloblastoma_CL_425C2626421031   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211013531   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762034431   
SAGE_Brain_medulloblastoma_B_96-04-P01952645830   
SAGE_Brain_medulloblastoma_CL_D283663161030   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182143330   
SAGE_Colon_adenocarcinoma_CL_Caco260682929   
SAGE_Bladder_Cancer_B_hs0241333580146828   
SAGE_Breast_normal_myoepithelium_CL_HME5055516828   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549084728   
SAGE_Brain_glioblastoma_CL_stem_cells1084141527   
SAGE_Pancreas_normal_B_121520327   
SAGE_Testis_Embyronal_Carcinoma_B_166352927   
SAGE_Uterus_normal_B_hs0195371846350427   
SAGE_Brain_medulloblastoma_B_H132259498826   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725826   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen792841025   
SAGE_Skin_Normal_B_hs0271580768674125   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221424   
SAGE_Brain_medulloblastoma_B_98-05-P60848451624   
SAGE_Brain_oligodendroglioma_B_100132442424   
SAGE_Breast_normal_organoid_B58181724   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014325024   
SAGE_Vein_normal_B_hs0237613568875424   
SAGE_Brain_astrocytoma_grade_III_B_3431001581223   
SAGE_Brain_ependymoma_B_H58068614823   
SAGE_Brain_medulloblastoma_B_98-04-P49443068523   
SAGE_Breast_carcinoma_B_95-34767070823   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024823   
SAGE_Skin_Cancer_B_hs0284389250746023   
SAGE_Uterus_Normal_B_hs0194645262374623   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441222   
SAGE_Brain_astrocytoma_grade_II_B_H563885681022   
SAGE_Brain_medulloblastoma_B_H27572318822   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124038622   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080622   
SAGE_Retina_Peripheral_normal_B_21053121222   
SAGE_Bladder_Cancer_B_hs0265464019848921   
SAGE_Brain_astrocytoma_grade_II_B_H5301024391121   
SAGE_Brain_ependymoma_B_139456314621   
SAGE_Brain_glioblastoma_B_pooled56428621   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N1563994721   
SAGE_Retina_normal_B_4cRet1037011121   
SAGE_Skin_Normal_B_hs0272439755046821   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781121   
SAGE_Brain_astrocytoma_grade_II_B_H3591057641120   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096048820   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956620   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608337220   
SAGE_Eye_Retinoblastoma_B_hs038912434232127320   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548820   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970566220   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641320   
SAGE_Brain_ependymoma_B_R51084073819   
SAGE_GallBladder_Adenocarcinoma_B_C0181380819   
SAGE_Lymph_Node_Lymphoma_B_172008719   
SAGE_Lymph_node_Lymphoma_B_hs0196479148147919   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Brain_medulloblastoma_B_C60974612718   
SAGE_Ovary_carcinoma_CL_A278021369218   
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262718   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472418   
SAGE_Skin_Normal_B_hs0278304222128018   
SAGE_Brain_glioblastoma_CS_TA246678417   
SAGE_Brain_medulloblastoma_B_97-05-P01569971617   
SAGE_Breast_carcinoma_CL_MDA435H2446631417   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785717   
SAGE_Breast_metastatic_carcinoma_B_LN145087417   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006617   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398717   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724652417   
SAGE_Liver_cholangiocarcinoma_B_K2D46853417   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684850517   
SAGE_Skin_Melanoma_B_hs0273388177033817   
SAGE_Brain_ependymoma_B_115062373516   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741034316   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N581100786489716   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881816   
SAGE_Foreskin_normal_B_hs0305394035032716   
SAGE_GallBladder_Normal_B_HN85706716   
SAGE_Stomach_adenocarcinoma_MD_HS2958831516   
SAGE_Brain_ependymoma_B_R58252189415   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168515   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342415   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781415   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173615   
SAGE_Liver_normal_B_166308515   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674315   
SAGE_Stomach_carcinoma_B_xenograph_X4351620415   
SAGE_Bladder_Cancer_B_hs0266424461230214   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827614   
SAGE_Breast_normal_epithelium_CD44+_AP_N580464614   
SAGE_Colon_adenocarcinoma_B_Tu10255700414   
SAGE_Brain_astrocytoma_grade_III_B_584103008713   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Brain_medulloblastoma_B_H30660454413   
SAGE_Brain_normal_leptomeninges_B_AL272473513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967513   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575413   
SAGE_Placenta_first_trimester_normal_B_189265613   
SAGE_Prostate_normal_MD_PR31759277413   
SAGE_Skin_Cancer_B_hs0280361849824113   
SAGE_Skin_Melanoma_B_hs0275412822127413   
SAGE_Thyroid_normal_B_001115938813   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Brain_glioblastoma_B_R7099099612   
SAGE_Breast_carcinoma_B_IDC-464095412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Prostate_normal_B_264058412   
SAGE_Skin_Cancer_B_hs0279570329834412   
SAGE_Skin_Cancer_B_hs0283369223922812   
SAGE_Skin_Normal_B_hs0277526978933912   
SAGE_Stomach_adenocarcinoma_MD_G32946802312   
SAGE_Bladder_Cancer_B_hs0240621642637211   
SAGE_Brain_astrocytoma_grade_III_B_H102051573311   
SAGE_Brain_astrocytoma_grade_II_B_H516108116611   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_glioblastoma_B_H111068986411   
SAGE_Brain_glioblastoma_B_R336102322611   
SAGE_Brain_medulloblastoma_B_DL583671511   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478311   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512311   
SAGE_Breast_normal_stroma_B_IDC850485311   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319611   
SAGE_Lung_adenocarcinoma_B_136256211   
SAGE_Placenta_hydatidiform_mole_B_1101677611   
SAGE_Retina_Macula_normal_B_4Mac101417611   
SAGE_Skin_Melanoma_B_hs0274389521122711   
SAGE_Vein_normal_B_hs0230675562238011   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634311   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886610   
SAGE_Brain_astrocytoma_grade_III_B_R140118733610   
SAGE_Brain_ependymoma_B_R35373822410   
SAGE_Brain_glioblastoma_B_GBM106259762310   
SAGE_Brain_normal_peds_cortex_B_H157177554410   
SAGE_Breast_fibroadenoma_MD55688310   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469410   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015410   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151939   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639149   
SAGE_Brain_astrocytoma_grade_III_B_40710831259   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_astrocytoma_grade_III_B_H97010698259   
SAGE_Brain_ependymoma_B_R102312269069   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_glioblastoma_B_R2010105359   
SAGE_Brain_glioblastoma_control_CL_H2476042839   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Lung_normal_B_18870849   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_Brain_medulloblastoma_B_97-05-P3127429538   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341038   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170438   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Leukocytes_normal_B_14787328   
SAGE_Lymph_node_Lymphoma_B_hs020451789932198   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Placenta_normal_B_111808358   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Stomach_adenocarcinoma_MD_HG79371448   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Urothelium_normal_B_hs023931143071358   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041547   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC3142087551607   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199327   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Embryo_Pre-Cancer_B_hs032468930162447   
SAGE_Liver_cholangiocarcinoma_CL_K45297327   
SAGE_Muscle_normal_B_old5388927   
SAGE_Retina_macula_normal_B_HMAC210241747   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740226   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_normal_B_gestational hyperplasia16170426   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Lung_normal_CL_L162898316   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Skin_Normal_B_hs028244116361476   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_Brain_astrocytoma_grade_II_B_H12711448935   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_fetal_normal_B_S130554685   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568955   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938565   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986235   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_Skin_normal_B_NS3661515   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Heart_normal_B_18306324   
SAGE_Lung_normal_CL_L154222614   
SAGE_Retina_Peripheral_normal_B_4Peri12669134   
SAGE_Skin_Melanoma_B_hs027656318001174   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Normal_B_hs028165170891283   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002352   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274212   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765112   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003720   
SAGE_Bone_Marrow_Normal_FS_hs0404484254740   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880300   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223460