Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ATAAAAAAAA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Retina_Peripheral_normal_B_2105312143271   
SAGE_Skin_Melanoma_B_hs027338817702574132   
SAGE_Retina_Peripheral_normal_B_15966134113   
SAGE_Retina_macula_normal_B_HMAC210241758113   
SAGE_Skin_Melanoma_B_hs027438952112120108   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701613364105   
SAGE_Liver_normal_B_1663083296   
SAGE_Retina_normal_B_4cRet1037015096   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE772623795   
SAGE_Retina_Peripheral_normal_B_4Peri1266915586   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE901993373   
SAGE_Retina_Macula_normal_B_4Mac1014173772   
SAGE_Brain_medulloblastoma_B_DL7683922470   
SAGE_Skin_Normal_B_hs02715807686177761   
SAGE_Brain_normal_peds_cortex_B_H1571775542359   
SAGE_Brain_medulloblastoma_B_98-05-P040892582453   
SAGE_Skin_Melanoma_B_hs02765631800148952   
SAGE_Skin_Melanoma_B_hs02754128221102549   
SAGE_Brain_medulloblastoma_B_98-09-P558859841944   
SAGE_Brain_medulloblastoma_B_C609746121642   
SAGE_Skin_Normal_B_hs0272439755089640   
SAGE_Bone_marrow_normal_B_D0136577738   
SAGE_Lymph_Node_normal_B_1994261938   
SAGE_Brain_medulloblastoma_B_98-04-P11732570636   
SAGE_Lymph_node_Lymphoma_B_hs0196479148188436   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542836   
SAGE_Brain_medulloblastoma_B_H972853761535   
SAGE_Brain_normal_cerebellum_B_BB54240500734   
SAGE_Skin_Normal_B_hs0278304222151834   
SAGE_Brain_glioblastoma_B_GBM1062597621033   
SAGE_Brain_medulloblastoma_B_98-05-P60848451833   
SAGE_Peritoneum_normal_B_1353527933   
SAGE_Placenta_normal_B_11180832033   
SAGE_Brain_medulloblastoma_B_H1413618531032   
SAGE_Brain_ependymoma_B_R45551825830   
SAGE_Skin_Cancer_B_hs0283369223953829   
SAGE_GallBladder_Normal_B_HN857061228   
SAGE_Universal_reference_human_RNA_CL51729727   
SAGE_Vein_normal_B_hs0237613568884927   
SAGE_Brain_medulloblastoma_B_96-04-P01952645726   
SAGE_Breast_carcinoma_B_DCIS-460605826   
SAGE_Brain_ependymoma_B_23946653625   
SAGE_Breast_carcinoma_CL_MDA435H2446631625   
SAGE_Lymph_node_Lymphoma_B_hs0204517899366825   
SAGE_Spinal_cord_normal_B_154785725   
SAGE_Brain_ependymoma_B_R510840731023   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877723   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006823   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351823   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472523   
SAGE_Bladder_Cancer_B_hs0264583396864822   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221322   
SAGE_Brain_medulloblastoma_B_97-05-P01569971822   
SAGE_Breast_carcinoma_CL_MDA435C47270521   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049621   
SAGE_Breast_fibroadenoma_MD55688621   
SAGE_Stomach_normal_MD_13S45908521   
SAGE_Brain_medulloblastoma_B_H48457469620   
SAGE_Lung_normal_B_188708920   
SAGE_Ovary_normal_CS_HOSE_447728520   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819420   
SAGE_Bladder_Cancer_B_hs0265464019845119   
SAGE_Brain_medulloblastoma_B_H27572318719   
SAGE_Brain_normal_cerebellum_B_150385519   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091035319   
SAGE_Breast_carcinoma_B_IDC-560451619   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512519   
SAGE_Kidney_embryonic_CL_293-control41955419   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029419   
SAGE_Stomach_carcinoma_B_G18963075619   
SAGE_Breast_carcinoma_B_IDC-464095618   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168618   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891017   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Brain_glioblastoma_B_H1425C88990817   
SAGE_Brain_glioblastoma_B_H833100600917   
SAGE_Brain_medulloblastoma_B_H87667404617   
SAGE_Breast_carcinoma_B_95-34767070617   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344217   
SAGE_Thyroid_normal_B_0011159381017   
SAGE_Bladder_Cancer_B_hs0266424461234916   
SAGE_Brain_medulloblastoma_CL_mhh-147858416   
SAGE_Breast_carcinoma_metastasis_B_249794416   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575516   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_Liver_cholangiocarcinoma_B_K160319516   
SAGE_Ovary_normal_CL_IOSE29EC-1147159416   
SAGE_Prostate_normal_epithelium_CS_confluent71897616   
SAGE_Prostate_normal_epithelium_CS_senescent71717616   
SAGE_Skin_Normal_B_hs0277526978943716   
SAGE_Stomach_normal_epithelium_B_body124761216   
SAGE_Brain_Medulloblastoma_CL_425C262642515   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520515   
SAGE_Breast_normal_stroma_AP_179152615   
SAGE_Eye_Retinoblastoma_B_hs03891243423297115   
SAGE_Liver_cholangiocarcinoma_CL_K452973415   
SAGE_Brain_glioblastoma_B_H1353124805914   
SAGE_Brain_normal_substantia_nigra_B_141773314   
SAGE_Breast_carcinoma_MD_DCIS40783314   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Heart_normal_B_183063614   
SAGE_Kidney_normal_B_140993314   
SAGE_Liver_cholangiocarcinoma_CL_K354842414   
SAGE_Brain_ependymoma_B_R35373822513   
SAGE_Brain_ependymoma_B_R51275379513   
SAGE_Brain_medulloblastoma_B_98-04-P49443068313   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124022513   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970541713   
SAGE_Placenta_first_trimester_normal_B_189265613   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_Brain_oligodendroglioma_B_100132442212   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539412   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935412   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729312   
SAGE_Ovary_carcinoma_CL_ES2-131159212   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684835612   
SAGE_Skin_Cancer_B_hs0284389250723912   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985212   
SAGE_Bladder_Cancer_B_hs0241333580119211   
SAGE_Brain_astrocytoma_grade_III_B_343100158611   
SAGE_Brain_ependymoma_B_R58252189311   
SAGE_Brain_glioblastoma_B_H111068986411   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765411   
SAGE_Foreskin_normal_B_hs0305394035021911   
SAGE_Retina_Retinoblastoma_B_188490511   
SAGE_Skin_Cancer_B_hs0279570329831711   
SAGE_Urothelium_normal_B_hs0239311430717511   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956310   
SAGE_Breast_normal_organoid_B58181310   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608318610   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Vascular_endothelium_hemangioma_B_14675680410   
SAGE_Vein_normal_B_hs0230675562236010   
SAGE_Brain_fetal_normal_B_S1305546149   
SAGE_Brain_glioblastoma_B_R33610232259   
SAGE_Brain_medulloblastoma_CL_D2836631639   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen4005229   
SAGE_Breast_metastatic_carcinoma_B_LN26034339   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Brain_astrocytoma_grade_III_B_H2729605948   
SAGE_Brain_astrocytoma_grade_III_B_R14011873358   
SAGE_Brain_normal_cortex_B_BB5429423348   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601898   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396738   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802438   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448898   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Skin_Cancer_B_hs028036184981508   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902568   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_II_B_H53010243947   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_medulloblastoma_B_DL58367137   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986247   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Embryo_Pre-Cancer_B_hs032468930162517   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432157   
SAGE_GallBladder_Adenocarcinoma_B_C018138037   
SAGE_Muscle_normal_B_old5388927   
SAGE_Muscle_normal_B_young5394727   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Retina_Pigment_epithelium_normal_B_15366627   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Uterus_normal_B_hs019537184631477   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_Vascular_normal_CS_control5164227   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493736   
SAGE_Brain_astrocytoma_grade_II_B_H5638856836   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166876   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110176   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Skin_Normal_B_hs028244116361356   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466446   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Bladder_Cancer_B_hs024062164261585   
SAGE_Brain_astrocytoma_grade_III_B_43910782435   
SAGE_Brain_astrocytoma_grade_III_B_H105510988635   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170425   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217065   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Placenta_hydatidiform_mole_B_110167735   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371164   
SAGE_Bone_Marrow_Normal_FS_hs040448425471124   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620364   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535354   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Uterus_Normal_B_hs019464526231414   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_R92710734423   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755643   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Skin_Normal_B_hs028165170891043   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604622   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568502   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410411   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688040   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422360   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600270   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227420   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093880   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N581100786470   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821410