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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AGGGACTGAA

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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200,000
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Code
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344326   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303424   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741039018   
SAGE_Breast_carcinoma_CL_MDA435H2446631417   
SAGE_Breast_carcinoma_B_DCIS-460605516   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797315   
SAGE_Prostate_adenocarcinoma_MD_PR31764951515   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096025110   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227410   
SAGE_Ovary_cystadenoma_CL_ML10-1055144310   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Stomach_normal_MD_14S73353410   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Lung_adenocarcinoma_MD_L108688749   
SAGE_Prostate_carcinoma_CL_LNCaP6025039   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_Breast_carcinoma_CL_MDA435C4727028   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC4033812401156   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_glioblastoma_B_H11106898625   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775725   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Colon_normal_B_NC14961014   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611364   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901354   
SAGE_Vein_normal_B_hs023761356881284   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878624   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143283   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Vein_normal_B_hs023067556221043   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755442   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Embryo_Pre-Cancer_B_hs03246893016732   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246532   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357712   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02664244612411   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604391   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910351   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568231   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274111   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110121   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217021   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Eye_Retinoblastoma_B_hs038912434232841   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Cancer_B_hs02843892507231   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs02406216426140   
SAGE_Bladder_Cancer_B_hs02645833968150   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003720   
SAGE_Bone_Marrow_Normal_FS_hs0404484254740   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880160   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223210   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002120   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093820   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864210   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608360   
SAGE_Foreskin_normal_B_hs03053940350110   
SAGE_Lymph_node_Lymphoma_B_hs0196479148130   
SAGE_Lymph_node_Lymphoma_B_hs0204517899390   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684870   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970550   
SAGE_Skin_Cancer_B_hs02795703298120   
SAGE_Skin_Cancer_B_hs02803618498120   
SAGE_Skin_Cancer_B_hs0283369223960   
SAGE_Skin_Melanoma_B_hs0273388177080   
SAGE_Skin_Melanoma_B_hs02743895211170   
SAGE_Skin_Melanoma_B_hs02754128221200   
SAGE_Skin_Melanoma_B_hs02765631800240   
SAGE_Skin_Normal_B_hs02715807686200   
SAGE_Skin_Normal_B_hs02775269789120   
SAGE_Skin_Normal_B_hs02783042221150   
SAGE_Skin_Normal_B_hs0281651708940   
SAGE_Urothelium_normal_B_hs02393114307100   
SAGE_Uterus_Normal_B_hs01946452623230   
SAGE_Uterus_normal_B_hs01953718463150