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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AGACGCTTTC

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398614   
SAGE_Brain_medulloblastoma_B_98-13-P30145342313   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704411   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Breast_carcinoma_B_IDC-56045139   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831959   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878537   
SAGE_Brain_medulloblastoma_B_H14136185326   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Prostate_normal_B_26405826   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Vein_normal_B_hs023067556221875   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910794   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357724   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_Melanoma_B_hs02743895211964   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Skin_Melanoma_B_hs02733881770723   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02645833968632   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_GallBladder_Normal_B_HN8570612   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Skin_Melanoma_B_hs02765631800632   
SAGE_Skin_Normal_B_hs02816517089732   
SAGE_Skin_Normal_B_hs02824411636592   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490652   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bladder_Cancer_B_hs02406216426461   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037251   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604281   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410391   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755271   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240181   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryo_Pre-Cancer_B_hs03246893016361   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217021   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Eye_Retinoblastoma_B_hs038912434232871   
SAGE_Foreskin_normal_B_hs03053940350251   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848401   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705381   
SAGE_Skin_Cancer_B_hs02795703298491   
SAGE_Skin_Normal_B_hs02775269789511   
SAGE_Skin_Normal_B_hs02783042221251   
SAGE_Vein_normal_B_hs02376135688551   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs02413335801100   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bladder_Cancer_B_hs0266424461240   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960160   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568100   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688030   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422340   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600220   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876530   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864240   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608340   
SAGE_Skin_Cancer_B_hs02803618498150   
SAGE_Skin_Cancer_B_hs02833692239130   
SAGE_Skin_Cancer_B_hs02843892507150   
SAGE_Skin_Melanoma_B_hs0275412822130   
SAGE_Skin_Normal_B_hs0271580768670   
SAGE_Skin_Normal_B_hs02724397550110   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161260   
SAGE_Urothelium_normal_B_hs0239311430790   
SAGE_Uterus_Normal_B_hs01946452623130   
SAGE_Uterus_normal_B_hs0195371846370