Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ACTTCACAAA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786816   
SAGE_Brain_normal_cerebellum_B_BB54240500314   
SAGE_Ovary_adenocarcinoma_B_OVT-753514414   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913714   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124021212   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785512   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091020611   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Lymph_Node_Lymphoma_B_172008411   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158611   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_ependymoma_B_R35373822410   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Skin_Melanoma_B_hs0273388177020510   
SAGE_Bladder_Cancer_B_hs026546401982129   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072539   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Lung_normal_B_18870849   
SAGE_Skin_Melanoma_B_hs027656318002679   
SAGE_Brain_astrocytoma_grade_III_B_8289993948   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Breast_carcinoma_CL_MDA435C4727028   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396738   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110198   
SAGE_Leukocytes_normal_B_14787328   
SAGE_Lymph_node_Lymphoma_B_hs020451789932168   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482438   
SAGE_Placenta_normal_B_111808358   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Brain_astrocyte_normal_CL_NHA55148127   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101647   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166887   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203107   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902157   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Brain_astrocytoma_grade_II_B_H50112830946   
SAGE_Brain_glioblastoma_B_H1425C8899036   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601496   
SAGE_Breast_carcinoma_B_DCIS-46060526   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217076   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831236   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Lung_normal_CL_L162898316   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052046   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Skin_Cancer_B_hs027957032981986   
SAGE_Uterus_normal_B_hs019537184631126   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Bladder_Cancer_B_hs026642446121075   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Skin_Melanoma_B_hs02743895211985   
SAGE_Skin_Normal_B_hs027243975501315   
SAGE_Skin_Normal_B_hs028165170891785   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611905   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Bladder_Cancer_B_hs02413335801674   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-09-P5588598424   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604924   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755874   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384624   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143294   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Placenta_first_trimester_normal_B_18926524   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Vein_normal_B_hs023067556221404   
SAGE_Vein_normal_B_hs023761356881464   
SAGE_Bladder_Cancer_B_hs024062164261183   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Eye_Retinoblastoma_B_hs0389124342322353   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Muscle_normal_B_old5388913   
SAGE_Muscle_normal_B_young5394713   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Skin_Cancer_B_hs02803618498663   
SAGE_Skin_Normal_B_hs027158076861113   
SAGE_Skin_Normal_B_hs02783042221493   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Thyroid_normal_B_00111593823   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Urothelium_normal_B_hs02393114307603   
SAGE_Uterus_Normal_B_hs01946452623973   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02645833968792   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryo_Pre-Cancer_B_hs03246893016792   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246542   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Skin_Cancer_B_hs02843892507462   
SAGE_Skin_Melanoma_B_hs02754128221592   
SAGE_Skin_Normal_B_hs02775269789572   
SAGE_Skin_Normal_B_hs02824411636652   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568241   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274101   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641021   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448821   
SAGE_Foreskin_normal_B_hs03053940350391   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Cancer_B_hs02833692239361   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037130   
SAGE_Bone_Marrow_Normal_FS_hs04044842547210   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688080   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223140   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600270   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093850   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876520   
SAGE_Lymph_node_Lymphoma_B_hs01964791481220