Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ACCCTGGGCA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016563160   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011582753   
SAGE_White_Blood_Cells_monocyte_normal_AP_A1999132346   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987862346   
SAGE_Lung_adenocarcinoma_MD_L935916633   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426829   
SAGE_Fibroblasts_CL_postcrisis21833327   
SAGE_Esophagus_Dysplasia_B_HGD02786111025   
SAGE_Ovary_adenocarcinoma_B_OVT-831987425   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749324   
SAGE_Colon_adenocarcinoma_B_Tu9841371419   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577819   
SAGE_Prostate_carcinoma_CL_PC3_AS240768419   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA068021617   
SAGE_Colon_adenocarcinoma_CL_HCT11655641517   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344217   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765616   
SAGE_Stomach_normal_epithelium_B_body124761216   
SAGE_Brain_fetal_normal_B_S13055462415   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091028015   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342415   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469615   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757615   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819315   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827614   
SAGE_Brain_meningioma_grade_I_B_SF427169253514   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962714   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519413   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391613   
SAGE_Brain_medulloblastoma_B_98-13-P30145342313   
SAGE_Colon_adenocarcinoma_CL_Caco260682413   
SAGE_Muscle_Rhabdomyosarcoma_B_161270413   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA97291612   
SAGE_Brain_glioblastoma_CL_stem_cells108414712   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N1563994412   
SAGE_Colon_normal_B_NC248479312   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548512   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160412   
SAGE_Stomach_adenocarcinoma_MD_G32946802312   
SAGE_Stomach_adenocarcinoma_MD_HG793714612   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_glioblastoma_B_R336102322611   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX088439511   
SAGE_Lung_adenocarcinoma_MD_L1086887511   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Stomach_carcinoma_B_xenograft_X10169749411   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634311   
SAGE_Brain_meningioma_grade_I_B_SF446554647310   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227410   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Esophagus_Dysplasia_B_LGD0174904410   
SAGE_Vascular_normal_CS_VEGF+57316310   
SAGE_Vein_normal_B_hs0230675562236710   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Breast_carcinoma_B_DCIS-46060539   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen4005229   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616839   
SAGE_Liver_normal_B_16630839   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Placenta_hydatidiform_mole_B_110167759   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_Bladder_Cancer_B_hs024062164262718   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_normal_cortex_B_BB5429423348   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078644718   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170438   
SAGE_Colon_normal_B_NC14961028   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465128   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535398   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448898   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Urothelium_normal_B_hs023931143071298   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159537   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199327   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013227   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878537   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046437   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986247   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831947   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039837   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110187   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432157   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831357   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726237   
SAGE_Skin_Melanoma_B_hs027656318002107   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_ependymoma_B_R102312269046   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_normal_cortex_B_pool66245126   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC4033812401086   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821476   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923276   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482016   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Brain_astrocytoma_grade_III_B_40710831235   
SAGE_Brain_astrocytoma_grade_III_B_H105510988635   
SAGE_Brain_astrocytoma_grade_III_B_R14011873335   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_glioblastoma_CL_28d11062435   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041135   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620385   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173545   
SAGE_Kidney_carcinoma_B_D210028135   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Ovary_endometriosis_CL_E127609725   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901735   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Bladder_Cancer_B_hs02664244612894   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601044   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101004   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384624   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lung_normal_B_18870824   
SAGE_Lymph_node_Lymphoma_B_hs020451789931094   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Skin_Cancer_B_hs027957032981264   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Uterus_normal_B_hs01953718463864   
SAGE_Bladder_Cancer_B_hs02413335801523   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_III_B_R92710734423   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568733   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755653   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217043   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Skin_Melanoma_B_hs02743895211643   
SAGE_Skin_Normal_B_hs027158076861043   
SAGE_Skin_Normal_B_hs02724397550863   
SAGE_Skin_Normal_B_hs028165170891293   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611213   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_Thyroid_normal_B_00111593823   
SAGE_Uterus_Normal_B_hs019464526231293   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02645833968652   
SAGE_Bladder_Cancer_B_hs02654640198552   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468801262   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002342   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938212   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryo_Pre-Cancer_B_hs032468930161002   
SAGE_Eye_Retinoblastoma_B_hs0389124342321742   
SAGE_Heart_normal_B_18306312   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705842   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Skin_Cancer_B_hs02833692239452   
SAGE_Skin_Cancer_B_hs02843892507522   
SAGE_Skin_Melanoma_B_hs02754128221602   
SAGE_Skin_Normal_B_hs02824411636492   
SAGE_Vein_normal_B_hs02376135688862   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223901   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765101   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166821   
SAGE_Foreskin_normal_B_hs03053940350231   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Skin_Cancer_B_hs02803618498331   
SAGE_Skin_Melanoma_B_hs02733881770381   
SAGE_Skin_Normal_B_hs02775269789521   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037140   
SAGE_Bone_Marrow_Normal_FS_hs0404484254730   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227450   
SAGE_Lymph_node_Lymphoma_B_hs0196479148170   
SAGE_Skin_Normal_B_hs02783042221120