Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: ACAGGCTACG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE0777578402160   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX0884396201402   
SAGE_Brain_astrocyte_normal_CL_NHA5514813491355   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU075019320853   
SAGE_Prostate_normal_MD_PR31759277251846   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA068021219643   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091196602   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577164392   
SAGE_Breast_carcinoma_B_IDC-464095122380   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173128336   
SAGE_Ovary_cystadenoma_CL_ML10-105514492333   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962149301   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774756296   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N4810487651525290   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK085944124288   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600877274   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531484257   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722265227   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA093846106225   
SAGE_Brain_normal_leptomeninges_B_AL27247378215   
SAGE_Lung_normal_CL_L162898330207   
SAGE_Pancreas_adenocarcinoma_B_96-62523321332192   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247850190   
SAGE_Ovary_adenocarcinoma_B_OVT-64144339188   
SAGE_Skin_normal_B_NS3661534185   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702352182   
SAGE_Pancreas_adenocarcinoma_B_91-161133358230178   
SAGE_Fibroblasts_CL_postcrisis2183319174   
SAGE_Uterus_normal_B_hs019537184633126168   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176558161   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353950157   
SAGE_Brain_glioblastoma_control_CL_H2476042847155   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396757154   
SAGE_Colon_adenocarcinoma_CL_Caco26068245148   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078647603138   
SAGE_Vascular_endothelium_hemangioma_B_1467568052137   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278136136   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986274134   
SAGE_Prostate_adenocarcinoma_MD_PR3176495143132   
SAGE_Breast_fibroadenoma_MD5568835125   
SAGE_Breast_carcinoma_metastasis_B_24979431124   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046450124   
SAGE_Uterus_endometrium_normal_CS_DI12199113118   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199330115   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831959108   
SAGE_Stomach_adenocarcinoma_MD_HS295883131105   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399432100   
SAGE_Breast_normal_stroma_B_IDC8504852599   
SAGE_GallBladder_Adenocarcinoma_B_NAM01785483999   
SAGE_Ovary_endometriosis_CL_E12760973386   
SAGE_Stomach_adenocarcinoma_B_G234649252886   
SAGE_Ovary_carcinoma_CL_A278021369984   
SAGE_Vascular_normal_CS_VEGF+573162380   
SAGE_Brain_glioblastoma_B_R3361023223772   
SAGE_Stomach_adenocarcinoma_MD_G329468021772   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS6814522971   
SAGE_Breast_normal_epithelium_MUC1+_AP_N5762272668   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568126866   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC29540801866   
SAGE_Lung_adenocarcinoma_MD_L10868872966   
SAGE_Ovary_adenocarcinoma_B_OVT-8319871062   
SAGE_Ovary_adenocarcinoma_B_OVT-7535141659   
SAGE_Brain_glioblastoma_B_pooled564281656   
SAGE_Brain_normal_cortex_B_pool6624511754   
SAGE_Kidney_normal_B_1409931153   
SAGE_Lung_normal_CL_L15422261152   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP787852050   
SAGE_Prostate_normal_B_2640581546   
SAGE_Vascular_normal_CS_control516421246   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS6661761545   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121704643   
SAGE_Brain_ependymoma_B_R512753791642   
SAGE_Colon_adenocarcinoma_CL_RKO512941142   
SAGE_Muscle_Rhabdomyosarcoma_B_1612701342   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244884741   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399740   
SAGE_GallBladder_Normal_B_HN857061739   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P2502971039   
SAGE_Heart_normal_B_1830631638   
SAGE_Skin_Cancer_B_hs02795703298108438   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724655137   
SAGE_Prostate_carcinoma_CL_LNCaP602501136   
SAGE_Breast_carcinoma_B_BWHT18_DCIS50701935   
SAGE_GallBladder_Adenocarcinoma_B_C01813801434   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC8665201133   
SAGE_Colon_adenocarcinoma_B_Tu9841371733   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762034633   
SAGE_Ovary_normal_CL_IOSE29EC-1147159833   
SAGE_Ovary_normal_CS_HOSE_447728833   
SAGE_Brain_glioblastoma_CL_H39255990932   
SAGE_Breast_carcinoma_B_DCIS-543098732   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905832   
SAGE_Brain_ependymoma_B_R6281204311931   
SAGE_Brain_glioblastoma_B_H1110689861131   
SAGE_Brain_ependymoma_B_R45551825830   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093828830   
SAGE_Muscle_normal_B_old53889829   
SAGE_Peritoneum_normal_B_1353527829   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC7690061028   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211013128   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092323028   
SAGE_Skin_Normal_B_hs0272439755061728   
SAGE_Testis_Embyronal_Carcinoma_B_166352927   
SAGE_Breast_carcinoma_B_IDC-368891926   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024926   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691026   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872726   
SAGE_Spinal_cord_normal_B_154785725   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC1777591025   
SAGE_Brain_meningioma_grade_II_B_SF217648711624   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049724   
SAGE_Embryo_Pre-Cancer_B_hs0324689301684524   
SAGE_Skin_Cancer_B_hs0283369223946124   
SAGE_Brain_ependymoma_B_H58068614823   
SAGE_Skin_Normal_B_hs0271580768669623   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342622   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182142522   
SAGE_Bone_marrow_normal_B_D0136577421   
SAGE_Brain_Medulloblastoma_CL_UW228-N949371021   
SAGE_Prostate_carcinoma_B_pool266034721   
SAGE_Stomach_adenocarcinoma_MD_HG7937141021   
SAGE_Brain_glioblastoma_B_H137149338520   
SAGE_Skin_Melanoma_B_hs0276563180058020   
SAGE_Uterus_Normal_B_hs0194645262367320   
SAGE_Breast_carcinoma_B_IDC-560451619   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634519   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011581019   
SAGE_Brain_astrocytoma_grade_I_B_H104375922718   
SAGE_Eye_lens_B_UIHI085898818   
SAGE_Muscle_normal_B_young53947518   
SAGE_Brain_glioblastoma_B_H1425C88990817   
SAGE_Breast_normal_organoid_B58181517   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988617   
SAGE_Brain_ependymoma_B_R35373822616   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857616   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Brain_medulloblastoma_B_127338614315   
SAGE_Brain_normal_cerebellum_B_150385415   
SAGE_Kidney_carcinoma_B_D2100281815   
SAGE_Brain_astrocytoma_grade_III_B_H27296059714   
SAGE_Brain_ependymoma_B_R1023122690914   
SAGE_Brain_meningioma_grade_I_B_SF427169253514   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Brain_glioblastoma_B_H833100600713   
SAGE_Breast_carcinoma_B_DCIS-460605413   
SAGE_Skin_Normal_B_hs0281651708944113   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741025812   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227411112   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531312   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512311   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704411   
SAGE_Lung_normal_B_188708511   
SAGE_Prostate_normal_epithelium_CS_senescent71717411   
SAGE_Brain_astrocytoma_grade_III_B_R140118733610   
SAGE_Brain_meningioma_grade_I_B_SF446554647310   
SAGE_Brain_normal_peds_cortex_B_H157177554410   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688051810   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422372210   
SAGE_Breast_normal_stroma_AP_179152410   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES1151735810   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608318710   
SAGE_Foreskin_normal_B_hs0305394035021310   
SAGE_Lymph_Node_normal_B_199426510   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Brain_fetal_normal_B_S1305546149   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616839   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593539   
SAGE_Breast_normal_B_gestational hyperplasia16170439   
SAGE_Skin_Normal_B_hs027752697892449   
SAGE_Skin_melanoma_B_DB24133829   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287359   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_MD_LCIS6783438   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918448   
SAGE_Skin_Cancer_B_hs028036184981488   
SAGE_Skin_Melanoma_B_hs027541282211858   
SAGE_Skin_Normal_B_hs027830422211338   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991348   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021177   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Skin_Melanoma_B_hs027438952111377   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432146   
SAGE_Liver_cholangiocarcinoma_B_K16031926   
SAGE_Liver_normal_B_16630826   
SAGE_Retina_Peripheral_normal_B_4Peri12669146   
SAGE_Thyroid_normal_B_00111593846   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Placenta_normal_B_111808335   
SAGE_Skin_Cancer_B_hs028438925071085   
SAGE_Skin_Melanoma_B_hs027338817701025   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041004   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240824   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Eye_Retinoblastoma_B_hs0389124342322814   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lymph_node_Lymphoma_B_hs020451789931264   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019924   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611414   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Bladder_Cancer_B_hs026458339681023   
SAGE_Bladder_Cancer_B_hs02654640198883   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166843   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901183   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Skin_Normal_B_hs02824411636552   
SAGE_Vein_normal_B_hs02376135688732   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848441   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Bladder_Cancer_B_hs02406216426280   
SAGE_Bladder_Cancer_B_hs0241333580120   
SAGE_Bladder_Cancer_B_hs0266424461250   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003740   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960130   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091040   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755170   
SAGE_Lymph_node_Lymphoma_B_hs01964791481210   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970550   
SAGE_Urothelium_normal_B_hs0239311430740   
SAGE_Vein_normal_B_hs02306755622100