Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AATGACTGAA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Ovary_carcinoma_CL_A278021369656   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608394652   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211015247   
SAGE_Lung_normal_CL_L1542226942   
SAGE_Brain_glioblastoma_hypoxia_CL_H247717651541   
SAGE_Brain_glioblastoma_CL_stem_cells1084142240   
SAGE_Vein_normal_B_hs02306755622133839   
SAGE_Stomach_adenocarcinoma_B_G234649251236   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161117136   
SAGE_Vein_normal_B_hs02376135688113036   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092323735   
SAGE_Brain_glioblastoma_B_H1110689861234   
SAGE_Prostate_normal_B_2640581134   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP01083191731   
SAGE_Brain_ependymoma_B_R58252189830   
SAGE_Liver_normal_B_1663081030   
SAGE_Skin_Melanoma_B_hs0275412822163630   
SAGE_Brain_glioblastoma_control_CL_H24760428929   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549085228   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091048827   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875557227   
SAGE_Lung_normal_CL_L1628983427   
SAGE_Pancreas_carcinoma_CL_PL4529557427   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877826   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014325426   
SAGE_Bladder_Cancer_B_hs0241333580141825   
SAGE_Brain_glioblastoma_CS_TA246678625   
SAGE_Breast_carcinoma_CL_MDA435H2446631625   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121702725   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519325   
SAGE_Ovary_carcinoma_CL_ES2-131159425   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935824   
SAGE_Pancreas_adenocarcinoma_B_96-625233213424   
SAGE_Peritoneum_mesothelioma_B_1232529424   
SAGE_Lung_adenocarcinoma_MD_L10868871023   
SAGE_Lung_adenocarcinoma_MD_L935916422   
SAGE_Brain_ependymoma_B_23946653521   
SAGE_Brain_medulloblastoma_B_97-05-P31274295821   
SAGE_Embryo_Pre-Cancer_B_hs0324689301675521   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182142421   
SAGE_Kidney_carcinoma_B_D21002811121   
SAGE_Brain_medulloblastoma_CL_mhh-147858520   
SAGE_Brain_astrocyte_normal_CL_NHA551481519   
SAGE_Brain_glioblastoma_B_H13531248051219   
SAGE_Breast_carcinoma_CL_MDA435H4840323419   
SAGE_Stomach_carcinoma_B_xenograph_X4351620519   
SAGE_Universal_reference_human_RNA_CL51729519   
SAGE_Bladder_Cancer_B_hs0240621642656118   
SAGE_Bone_Marrow_Normal_FS_hs0404484254745918   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660440518   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244882118   
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_Pancreas_normal_B_121520218   
SAGE_Brain_ependymoma_B_139456314517   
SAGE_Brain_glioblastoma_CL_4d1152121017   
SAGE_Colon_adenocarcinoma_CL_HCT11655641517   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681817   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531817   
SAGE_GallBladder_Adenocarcinoma_B_C0181380717   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344217   
SAGE_Stomach_adenocarcinoma_MD_G32946802417   
SAGE_Thyroid_follicular_adenoma_B_TT005101578917   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641117   
SAGE_Vascular_normal_CS_VEGF+57316517   
SAGE_Bladder_Cancer_B_hs0264583396848716   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725516   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724652316   
SAGE_Prostate_carcinoma_CL_LNCaP60250516   
SAGE_Prostate_normal_epithelium_CS_senescent71717616   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747315   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819315   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Brain_glioblastoma_CL_H39255990414   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982414   
SAGE_Brain_medulloblastoma_B_DL583671614   
SAGE_Colon_adenocarcinoma_B_Tu9841371314   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398614   
SAGE_Ovary_adenocarcinoma_B_OVT-753514414   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Stomach_carcinoma_B_xenograft_X10169749514   
SAGE_Brain_astrocytoma_grade_III_B_R140118733813   
SAGE_Brain_ependymoma_B_R51275379513   
SAGE_Brain_glioblastoma_B_H1425C88990613   
SAGE_Brain_medulloblastoma_CL_H34143920313   
SAGE_Breast_carcinoma_B_IDC-560451413   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162413   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857513   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762031913   
SAGE_Esophagus_Adenocarcinoma_B_CA1D73793513   
SAGE_Eye_lens_B_UIHI085898613   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542313   
SAGE_Skin_Cancer_B_hs0284389250725713   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124021012   
SAGE_Breast_carcinoma_CL_MDA435C47270312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548512   
SAGE_Pancreas_carcinoma_CL_ASPC31224212   
SAGE_Skin_Melanoma_B_hs0273388177023512   
SAGE_Stomach_adenocarcinoma_MD_HG793714612   
SAGE_Brain_ependymoma_B_R45551825311   
SAGE_Brain_glioblastoma_B_H833100600611   
SAGE_Brain_medulloblastoma_B_96-04-P01952645311   
SAGE_Brain_medulloblastoma_B_H27572318411   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096026611   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Lung_normal_B_188708511   
SAGE_Muscle_normal_B_old53889311   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Brain_astrocytoma_grade_II_B_H501128309710   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Breast_normal_myoepithelium_CL_HME5055516310   
SAGE_Eye_Retinoblastoma_B_hs03891243423265610   
SAGE_Liver_cholangiocarcinoma_CL_K354842310   
SAGE_Placenta_normal_B_1118083610   
SAGE_Skin_Melanoma_B_hs0274389521120610   
SAGE_Skin_Normal_B_hs0271580768629310   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Stomach_normal_MD_14S73353410   
SAGE_Thyroid_normal_B_001115938610   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759410   
SAGE_Bladder_Cancer_B_hs026642446122039   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159549   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_ependymoma_B_R5108407349   
SAGE_Brain_medulloblastoma_B_98-04-P4944306829   
SAGE_Breast_normal_B_gestational hyperplasia16170439   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986259   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173579   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Prostate_carcinoma_B_pool26603439   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Skin_Cancer_B_hs028036184981789   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802438   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341038   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698838   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Prostate_normal_epithelium_CS_confluent7189738   
SAGE_Skin_Normal_B_hs027243975501888   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Urothelium_normal_B_hs023931143071288   
SAGE_Bladder_Cancer_B_hs026546401981797   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013227   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878537   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501937   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Esophagus_Dysplasia_B_HGD027861137   
SAGE_Muscle_normal_B_young5394727   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052517   
SAGE_Skin_Cancer_B_hs028336922391407   
SAGE_Skin_Normal_B_hs027830422211147   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Brain_ependymoma_B_R62812043146   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101326   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Liver_cholangiocarcinoma_B_K16031926   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481756   
SAGE_Prostate_normal_MD_PR3175927726   
SAGE_Skin_Normal_B_hs028244116361376   
SAGE_Uterus_normal_B_hs019537184631236   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_III_B_40710831235   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681065   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Skin_Cancer_B_hs027957032981695   
SAGE_Skin_Normal_B_hs027752697891365   
SAGE_Skin_Normal_B_hs028165170891785   
SAGE_Skin_normal_B_NS3661515   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_ependymoma_B_R102312269034   
SAGE_Brain_medulloblastoma_B_H9728537624   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_normal_B_NC14961014   
SAGE_Foreskin_normal_B_hs03053940350974   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Placenta_first_trimester_normal_B_18926524   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037833   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Lymph_node_Lymphoma_B_hs02045178993913   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Melanoma_B_hs027656318001033   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Uterus_Normal_B_hs019464526231143   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Lymph_node_Lymphoma_B_hs01964791481562   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_fetal_normal_B_S130554631   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864891   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688070   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422380   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600290   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227490   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876540