Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AAGGTAACTT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361735   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP751471129   
SAGE_Brain_ependymoma_B_115062373825   
SAGE_Breast_carcinoma_MD_DCIS40783524   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168824   
SAGE_Brain_medulloblastoma_B_H132259498723   
SAGE_Brain_fetal_normal_B_S13055463321   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857821   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519619   
SAGE_Brain_ependymoma_B_139456314517   
SAGE_Brain_medulloblastoma_B_97-05-P01569971617   
SAGE_Brain_medulloblastoma_B_C60974612616   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704616   
SAGE_Brain_medulloblastoma_B_98-05-P04089258715   
SAGE_Retina_normal_B_4cRet103701815   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634415   
SAGE_Brain_ependymoma_B_R628120431914   
SAGE_Brain_medulloblastoma_B_H97285376614   
SAGE_Brain_normal_cerebellum_B_BB54240500314   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430314   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029314   
SAGE_Breast_carcinoma_B_DCIS-543098313   
SAGE_Breast_metastatic_carcinoma_B_LN260343413   
SAGE_Brain_astrocytoma_grade_II_B_H127114489712   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-04-P11732570212   
SAGE_Liver_normal_B_166308412   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Ovary_carcinoma_CL_ES2-131159212   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Brain_astrocyte_normal_CL_NHA551481311   
SAGE_Brain_astrocytoma_grade_III_B_439107824611   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS751993311   
SAGE_Breast_normal_FS_NER34565211   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426311   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Brain_glioblastoma_CL_4d115212610   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877310   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785410   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759410   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082749   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072539   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101119   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE14212170109   
SAGE_Lung_normal_CL_L154222629   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Pancreas_normal_B_12152019   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Brain_ependymoma_B_R3537382238   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Brain_normal_leptomeninges_B_AL27247338   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821498   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448898   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902438   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466458   
SAGE_Thyroid_normal_B_00111593858   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_III_B_H105510988647   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Brain_glioblastoma_B_R33610232247   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535387   
SAGE_Muscle_normal_B_young5394727   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Retina_Macula_normal_B_4Mac10141747   
SAGE_Skin_Cancer_B_hs028336922391317   
SAGE_Skin_Normal_B_hs027243975501577   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_astrocytoma_grade_II_B_H50112830946   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Brain_medulloblastoma_B_98-09-P5588598436   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923276   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831246   
SAGE_Foreskin_normal_B_hs030539403501326   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Skin_Cancer_B_hs027957032981986   
SAGE_Skin_Melanoma_B_hs027338817701336   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611976   
SAGE_Brain_astrocytoma_grade_III_B_R14011873335   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Eye_Retinoblastoma_B_hs0389124342323195   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Retina_macula_normal_B_HMAC210241735   
SAGE_Skin_Melanoma_B_hs027541282211185   
SAGE_Skin_Normal_B_hs027752697891375   
SAGE_Uterus_Normal_B_hs019464526231805   
SAGE_Uterus_normal_B_hs01953718463945   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Bladder_Cancer_B_hs026546401981024   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910864   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432104   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lung_normal_B_18870824   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019924   
SAGE_Skin_Melanoma_B_hs02743895211854   
SAGE_Skin_Normal_B_hs02783042221644   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878624   
SAGE_Bladder_Cancer_B_hs02664244612683   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410803   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240593   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938293   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166843   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620353   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Lymph_node_Lymphoma_B_hs02045178993973   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481093   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Skin_Cancer_B_hs02803618498723   
SAGE_Skin_Normal_B_hs027158076861153   
SAGE_Skin_Normal_B_hs028165170891243   
SAGE_Skin_Normal_B_hs02824411636843   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Urothelium_normal_B_hs02393114307503   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02413335801392   
SAGE_Bladder_Cancer_B_hs02645833968762   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960632   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002342   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Cancer_B_hs02843892507422   
SAGE_Vein_normal_B_hs023067556221002   
SAGE_Vein_normal_B_hs02376135688762   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02406216426531   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274151   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864931   
SAGE_Embryo_Pre-Cancer_B_hs03246893016521   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705471   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Skin_Melanoma_B_hs02765631800521   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003740   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604160   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568110   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755110   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880340   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223450   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876540   
SAGE_Lymph_node_Lymphoma_B_hs01964791481180