Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AAATTAAAAC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Skin_Melanoma_B_hs027338817703054157   
SAGE_Skin_Melanoma_B_hs027438952113039156   
SAGE_Eye_Retinoblastoma_B_hs0389124342326996112   
SAGE_Bladder_Cancer_B_hs02413335801166099   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083165691   
SAGE_Skin_Melanoma_B_hs02754128221169382   
SAGE_Bladder_Cancer_B_hs02645833968233379   
SAGE_Vein_normal_B_hs02376135688233376   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705203863   
SAGE_Brain_medulloblastoma_B_98-04-P117325701061   
SAGE_Bladder_Cancer_B_hs02654640198130656   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848162156   
SAGE_Skin_Normal_B_hs02724397550124556   
SAGE_Skin_Cancer_B_hs02843892507106254   
SAGE_Skin_Normal_B_hs02715807686157854   
SAGE_Brain_normal_substantia_nigra_B_1417731152   
SAGE_Lymph_Node_Lymphoma_B_1720081952   
SAGE_Brain_ependymoma_B_R353738221951   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519651   
SAGE_Urothelium_normal_B_hs0239311430779851   
SAGE_Brain_normal_cerebellum_B_BB542405001049   
SAGE_Lymph_node_Lymphoma_B_hs01964791481118449   
SAGE_Skin_Normal_B_hs0278304222175249   
SAGE_Bladder_Cancer_B_hs02406216426151948   
SAGE_Vein_normal_B_hs02306755622163848   
SAGE_Brain_ependymoblastoma_B_81933975847   
SAGE_Brain_glioblastoma_B_R201010532447   
SAGE_Skin_Cancer_B_hs0280361849886747   
SAGE_Brain_ependymoma_B_R455518251246   
SAGE_Brain_medulloblastoma_B_98-09-P558859842046   
SAGE_Universal_reference_human_RNA_CL517291246   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091080545   
SAGE_Breast_carcinoma_B_CT15_IDC21840545   
SAGE_Lung_adenocarcinoma_B_136256844   
SAGE_Bladder_Cancer_B_hs0266424461292543   
SAGE_Brain_astrocytoma_grade_III_B_R9271073442240   
SAGE_Skin_Normal_B_hs02816517089130840   
SAGE_Brain_astrocytoma_grade_III_B_3431001582039   
SAGE_Brain_medulloblastoma_B_H972853761739   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096092739   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875582639   
SAGE_Brain_ependymoma_B_R510840731638   
SAGE_Brain_glioblastoma_CL_stem_cells1084142138   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124062637   
SAGE_Skin_Cancer_B_hs0283369223969037   
SAGE_Skin_Normal_B_hs0282441163683337   
SAGE_Foreskin_normal_B_hs0305394035072136   
SAGE_Spinal_cord_normal_B_1547851036   
SAGE_Brain_medulloblastoma_B_H876674041235   
SAGE_Brain_glioblastoma_CL_28d1106241934   
SAGE_Brain_glioblastoma_CL_4d1152122034   
SAGE_Retina_Peripheral_normal_B_21053121834   
SAGE_Skin_Normal_B_hs0277526978992134   
SAGE_Retina_Retinoblastoma_B_1884901533   
SAGE_Brain_medulloblastoma_B_C609746121232   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb669881132   
SAGE_Brain_astrocytoma_grade_III_B_5841030081631   
SAGE_Breast_metastatic_carcinoma_B_LN145087731   
SAGE_GallBladder_Normal_B_HN857061330   
SAGE_Retina_Peripheral_normal_B_159661930   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221729   
SAGE_Brain_glioblastoma_B_H1425C889901329   
SAGE_Brain_medulloblastoma_B_98-05-P040892581329   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656856729   
SAGE_Breast_carcinoma_MD_DCIS40783629   
SAGE_Retina_Macula_normal_B_4Mac1014171529   
SAGE_Uterus_normal_B_hs0195371846354729   
SAGE_Brain_Medulloblastoma_CL_425C262642928   
SAGE_Brain_ependymoma_B_115062373928   
SAGE_Brain_ependymoma_B_139456314828   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517352228   
SAGE_Placenta_normal_B_11180831728   
SAGE_Brain_Medulloblastoma_CL_UW228-V2808271127   
SAGE_Brain_astrocytoma_grade_III_B_4071083121527   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660458327   
SAGE_Breast_carcinoma_B_DCIS-543098627   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132727   
SAGE_Breast_normal_organoid_B58181827   
SAGE_GallBladder_Adenocarcinoma_B_C01813801127   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331626   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891526   
SAGE_Breast_metastatic_carcinoma_B_LN260343826   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006926   
SAGE_Prostate_carcinoma_CL_LNCaP60250826   
SAGE_Brain_glioblastoma_B_H13531248051625   
SAGE_Breast_normal_stroma_AP_1791521025   
SAGE_Brain_astrocytoma_grade_II_B_H5011283091624   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551524   
SAGE_Heart_normal_B_1830631024   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029524   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549073724   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861323   
SAGE_Brain_glioblastoma_B_GBM106259762723   
SAGE_Brain_glioblastoma_B_R3361023221223   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121702523   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759923   
SAGE_Brain_astrocytoma_grade_II_B_H3591057641222   
SAGE_Brain_medulloblastoma_B_97-05-P01569971822   
SAGE_Brain_medulloblastoma_B_98-13-P30145342522   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741046622   
SAGE_Skin_Cancer_B_hs0279570329865322   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016172822   
SAGE_Thyroid_normal_B_0011159381322   
SAGE_Bone_marrow_normal_B_D0136577421   
SAGE_Brain_Medulloblastoma_CL_UW228-N949371021   
SAGE_Brain_glioblastoma_B_H8331006001121   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049621   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935721   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008621   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173821   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092322321   
SAGE_Prostate_normal_B_264058721   
SAGE_Retina_normal_B_4cRet1037011121   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS665314721   
SAGE_Brain_astrocytoma_grade_II_B_H56388568920   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877620   
SAGE_Breast_carcinoma_metastasis_B_249794520   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014324120   
SAGE_Brain_ependymoma_B_R58252189519   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781019   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641219   
SAGE_Brain_astrocytoma_grade_III_B_82899939918   
SAGE_Brain_astrocytoma_grade_III_B_H9701069821018   
SAGE_Brain_glioblastoma_B_R7099099918   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227718   
SAGE_Embryo_Pre-Cancer_B_hs0324689301664018   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681918   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211012018   
SAGE_Peritoneum_normal_B_1353527518   
SAGE_Brain_glioblastoma_CS_TA246678417   
SAGE_Breast_fibroadenoma_MD55688517   
SAGE_Liver_cholangiocarcinoma_B_K2D46853417   
SAGE_Retina_Peripheral_normal_B_4Peri1266911117   
SAGE_Retina_macula_normal_B_HMAC2102417917   
SAGE_Stomach_carcinoma_B_xenograft_X10169749617   
SAGE_Brain_astrocytoma_grade_III_B_H27296059816   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725516   
SAGE_Breast_carcinoma_CL_MDA435C47270416   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410616   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762032316   
SAGE_Lymph_node_Lymphoma_B_hs0204517899343816   
SAGE_Prostate_normal_epithelium_CS_confluent71897616   
SAGE_Stomach_adenocarcinoma_MD_HS2958831516   
SAGE_Uterus_Normal_B_hs0194645262354716   
SAGE_Brain_astrocytoma_grade_II_B_H530102439815   
SAGE_Brain_normal_cerebellum_B_150385415   
SAGE_Brain_normal_peds_cortex_B_H157177554615   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797315   
SAGE_Lung_normal_B_188708715   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA97291714   
SAGE_Brain_astrocytoma_grade_III_B_439107824814   
SAGE_Brain_medulloblastoma_B_DL583671614   
SAGE_Breast_carcinoma_B_IDC-368891514   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024514   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881614   
SAGE_Muscle_normal_B_old53889414   
SAGE_Skin_Melanoma_B_hs0276563180042114   
SAGE_Brain_ependymoma_B_R51275379513   
SAGE_Brain_medulloblastoma_B_97-05-P31274295513   
SAGE_Brain_medulloblastoma_B_H27572318513   
SAGE_Brain_medulloblastoma_B_H48457469413   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Muscle_Rhabdomyosarcoma_B_161270413   
SAGE_Placenta_hydatidiform_mole_B_1101677713   
SAGE_Prostate_normal_MD_PR31759277413   
SAGE_Brain_astrocytoma_grade_II_B_H516108116712   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Brain_medulloblastoma_B_H141361853412   
SAGE_Brain_medulloblastoma_CL_4-HCR66599412   
SAGE_Brain_medulloblastoma_CL_mhh-147858312   
SAGE_Brain_oligodendroglioma_B_100132442212   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD0109862712   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319712   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548512   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Stomach_adenocarcinoma_B_G23464925412   
SAGE_Brain_astrocytoma_grade_III_B_H102051573311   
SAGE_Brain_astrocytoma_grade_II_B_H388106285611   
SAGE_Brain_ependymoma_B_H58068614411   
SAGE_Brain_medulloblastoma_B_96-04-P01952645311   
SAGE_Brain_medulloblastoma_B_DL768392411   
SAGE_Breast_carcinoma_MD_LCIS67834411   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512311   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531211   
SAGE_Liver_cholangiocarcinoma_CL_K452973311   
SAGE_Prostate_normal_epithelium_CS_senescent71717411   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199511   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399211   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795311   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873611   
SAGE_Brain_medulloblastoma_B_127338614210   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956310   
SAGE_Lymph_Node_normal_B_199426510   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262410   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151939   
SAGE_Brain_medulloblastoma_B_H3066045439   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Breast_carcinoma_B_DCIS-46060539   
SAGE_Breast_carcinoma_B_IDC-56045139   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Liver_normal_B_16630839   
SAGE_Pancreas_normal_B_12152019   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Breast_carcinoma_B_95-3476707038   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Ovary_normal_CS_HOSE_44772828   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Stomach_adenocarcinoma_MD_HG79371448   
SAGE_Brain_fetal_normal_B_S1305546117   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514737   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046437   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821487   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Vascular_normal_CS_control5164227   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371576   
SAGE_Brain_ependymoma_B_R102312269046   
SAGE_Brain_normal_cortex_B_pool66245126   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594436   
SAGE_Liver_cholangiocarcinoma_B_K16031926   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_Bone_Marrow_Normal_FS_hs040448425471385   
SAGE_Brain_glioblastoma_B_H11106898625   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642895   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878525   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246585   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Esophagus_Normal_B_CN017563425   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Colon_normal_B_NC14961014   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Muscle_normal_B_young5394713   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274101   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880140   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422340   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002120   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093820   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510