Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AAAGCAGCAC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Brain_normal_thalamus_B_124015866   
SAGE_Brain_normal_cortex_B_pool6624511754   
SAGE_Brain_astrocytoma_grade_III_B_H9701069822750   
SAGE_Brain_normal_cerebellum_B_BB542405001049   
SAGE_Brain_normal_cerebellum_B_1503851247   
SAGE_Brain_medulloblastoma_B_H1322594981343   
SAGE_Retina_Macula_normal_B_4Mac1014172039   
SAGE_Brain_normal_cortex_B_BB542942331736   
SAGE_Brain_astrocytoma_grade_III_B_H272960591531   
SAGE_Brain_normal_peds_cortex_B_H1571775541128   
SAGE_Lung_adenocarcinoma_MD_L935916527   
SAGE_Brain_medulloblastoma_B_C609746121026   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU0750191026   
SAGE_Retina_macula_normal_B_HMAC21024171325   
SAGE_Spinal_cord_normal_B_154785725   
SAGE_Brain_normal_substantia_nigra_B_141773523   
SAGE_Eye_Retinoblastoma_B_hs038912434232146123   
SAGE_Retina_Peripheral_normal_B_159661723   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221322   
SAGE_Brain_medulloblastoma_B_97-05-P01569971822   
SAGE_Stomach_normal_B_antrum26653322   
SAGE_Brain_glioblastoma_CL_H39255990621   
SAGE_Bladder_Cancer_B_hs0264583396856519   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199919   
SAGE_Brain_astrocytoma_grade_I_B_H104375922718   
SAGE_Brain_medulloblastoma_B_98-09-P55885984818   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303318   
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542418   
SAGE_Breast_carcinoma_B_95-34767070617   
SAGE_Retina_Peripheral_normal_B_4Peri1266911117   
SAGE_Brain_medulloblastoma_B_98-05-P60848451416   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725516   
SAGE_Bladder_Cancer_B_hs0241333580126215   
SAGE_Brain_medulloblastoma_B_127338614315   
SAGE_Brain_astrocytoma_grade_III_B_82899939714   
SAGE_Brain_glioblastoma_CL_H54+LacZ66908514   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741030714   
SAGE_Brain_glioblastoma_B_R20101053713   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_medulloblastoma_B_H48457469413   
SAGE_Brain_meningioma_grade_III_B_SF236659786413   
SAGE_Brain_normal_leptomeninges_B_AL272473513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162413   
SAGE_Retina_Retinoblastoma_B_188490613   
SAGE_Retina_normal_B_4cRet103701713   
SAGE_Skin_Cancer_B_hs0279570329837613   
SAGE_Brain_Medulloblastoma_CL_425C262642412   
SAGE_Brain_meningioma_grade_II_B_SF217648711312   
SAGE_Brain_oligodendroglioma_B_100132442212   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124021412   
SAGE_Colon_normal_B_NC149610312   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262512   
SAGE_Brain_astrocyte_normal_CL_NHA551481311   
SAGE_Brain_astrocytoma_grade_II_B_H516108116611   
SAGE_Brain_glioblastoma_B_H1425C88990511   
SAGE_Brain_medulloblastoma_B_DL768392411   
SAGE_Breast_carcinoma_B_IDC-368891411   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319611   
SAGE_Retina_Peripheral_normal_B_2105312611   
SAGE_Vascular_normal_CS_control51642311   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA97291510   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Brain_glioblastoma_B_GBM106259762310   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Skin_Melanoma_B_hs0274389521120610   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913510   
SAGE_Bladder_Cancer_B_hs024062164262869   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159549   
SAGE_Brain_astrocytoma_grade_III_B_58410300859   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_astrocytoma_grade_II_B_H5638856849   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Brain_fetal_normal_B_S1305546159   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_GallBladder_Normal_B_HN8570649   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902959   
SAGE_Bladder_Cancer_B_hs026546401982008   
SAGE_Brain_ependymoma_B_R3537382238   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_glioblastoma_CS_TA24667828   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Lymph_Node_normal_B_19942648   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Skin_Melanoma_B_hs027338817701648   
SAGE_Skin_Melanoma_B_hs027541282211708   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_H105510988647   
SAGE_Brain_astrocytoma_grade_III_B_R92710734447   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Brain_astrocytoma_grade_II_B_H50112830957   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_glioblastoma_B_R33610232247   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_medulloblastoma_B_H9728537637   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765377   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110187   
SAGE_Lymph_node_Lymphoma_B_hs020451789932047   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Skin_Melanoma_B_hs027656318002037   
SAGE_Skin_Normal_B_hs027243975501717   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287347   
SAGE_Bladder_Cancer_B_hs026642446121396   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_astrocytoma_grade_II_B_H12711448946   
SAGE_Brain_glioblastoma_B_H135312480546   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_B_98-05-P0408925836   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509126   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594436   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Prostate_normal_MD_PR3175927726   
SAGE_Skin_Normal_B_hs027158076861966   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Brain_astrocytoma_grade_III_B_43910782435   
SAGE_Brain_astrocytoma_grade_III_B_R14011873335   
SAGE_Brain_glioblastoma_CL_28d11062435   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601385   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938555   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986235   
SAGE_Esophagus_Normal_B_CN017563425   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Skin_Cancer_B_hs028036184981015   
SAGE_Skin_Cancer_B_hs028336922391015   
SAGE_Stomach_normal_MD_14S7335325   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611675   
SAGE_Thyroid_normal_B_00111593835   
SAGE_Uterus_normal_B_hs019537184631075   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Vein_normal_B_hs023761356881685   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002714   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166854   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432104   
SAGE_Foreskin_normal_B_hs03053940350974   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_normal_B_14099314   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481164   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_Cancer_B_hs02843892507894   
SAGE_Skin_Normal_B_hs028165170891444   
SAGE_Vein_normal_B_hs023067556221574   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910693   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755843   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842232073   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryo_Pre-Cancer_B_hs032468930161123   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083593   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_normal_B_young5394713   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051243   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Skin_Normal_B_hs02775269789893   
SAGE_Skin_Normal_B_hs02824411636843   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_Urothelium_normal_B_hs02393114307543   
SAGE_Uterus_Normal_B_hs01946452623983   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604572   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568492   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468801072   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641142   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_normal_B_18870812   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Skin_Normal_B_hs02783042221402   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274161   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Lymph_node_Lymphoma_B_hs01964791481331   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Placenta_normal_B_111808311   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037180   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821410   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310