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Cancer Genome Characterization Initiative

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SAGE_Kidney_embryonic_CL_293-control41955733   
SAGE_Brain_meningioma_grade_II_B_SF362244857731   
SAGE_Brain_ependymoma_B_R58252189830   
SAGE_Muscle_normal_B_young53947829   
SAGE_Breast_carcinoma_B_CT15_IDC21840327   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542627   
SAGE_Brain_medulloblastoma_B_DL768392926   
SAGE_Brain_astrocytoma_grade_III_B_4071083121425   
SAGE_Brain_medulloblastoma_B_H972853761125   
SAGE_Breast_carcinoma_CL_MDA435C47270625   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096058224   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741050124   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124042224   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551524   
SAGE_Heart_normal_B_1830631024   
SAGE_Skin_Normal_B_hs0271580768670124   
SAGE_Stomach_adenocarcinoma_B_G23464925824   
SAGE_Vein_normal_B_hs0237613568873924   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-863911023   
SAGE_Brain_meningioma_grade_III_B_SF236659786723   
SAGE_Breast_carcinoma_B_IDC-368891823   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162723   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK0859441023   
SAGE_Skin_Normal_B_hs0272439755051823   
SAGE_Vascular_normal_CS_control51642623   
SAGE_Brain_medulloblastoma_CL_H34143920522   
SAGE_Breast_normal_B_gestational hyperplasia161704722   
SAGE_Skin_Melanoma_B_hs0275412822146322   
SAGE_Uterus_normal_B_hs0195371846342122   
SAGE_Breast_carcinoma_CL_MDA435H2446631521   
SAGE_Liver_cholangiocarcinoma_B_K2D46853521   
SAGE_Liver_cholangiocarcinoma_CL_K354842621   
SAGE_Retina_Macula_normal_B_4Mac1014171121   
SAGE_Spinal_cord_normal_B_154785621   
SAGE_Brain_astrocytoma_grade_III_B_H9701069821120   
SAGE_Brain_ependymoma_B_H58068614720   
SAGE_Brain_medulloblastoma_B_127338614420   
SAGE_Brain_medulloblastoma_CL_mhh-147858520   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877620   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819420   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641320   
SAGE_Thyroid_normal_B_0011159381220   
SAGE_Brain_glioblastoma_B_H8331006001019   
SAGE_Brain_medulloblastoma_B_H141361853619   
SAGE_Brain_medulloblastoma_B_H30660454619   
SAGE_Ovary_adenocarcinoma_B_OVT-641443419   
SAGE_Brain_medulloblastoma_CL_D28366316618   
SAGE_Liver_cholangiocarcinoma_CL_K452973518   
SAGE_Liver_normal_B_166308618   
SAGE_Pancreas_normal_CS_HX31985318   
SAGE_Prostate_carcinoma_B_pool266034618   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472418   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549054518   
SAGE_Breast_normal_FS_NER34565317   
SAGE_Esophagus_Dysplasia_B_HGD0278611717   
SAGE_Retina_Peripheral_normal_B_4Peri1266911117   
SAGE_Skin_Normal_B_hs0278304222126817   
SAGE_Thyroid_follicular_adenoma_B_TT005101578917   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519516   
SAGE_Bone_marrow_normal_B_D0136577316   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886916   
SAGE_Brain_medulloblastoma_B_97-05-P31274295616   
SAGE_Brain_medulloblastoma_B_98-05-P60848451416   
SAGE_Brain_normal_leptomeninges_B_AL272473616   
SAGE_Breast_carcinoma_B_IDC-560451516   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_GallBladder_Normal_B_HN85706716   
SAGE_Ovary_normal_CS_HOSE_447728416   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684846316   
SAGE_Skin_Cancer_B_hs0280361849830216   
SAGE_Skin_Melanoma_B_hs0274389521132416   
SAGE_Bladder_Cancer_B_hs0265464019835415   
SAGE_Brain_astrocytoma_grade_III_B_R140118733915   
SAGE_Brain_astrocytoma_grade_II_B_H359105764815   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351215   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092321615   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608328615   
SAGE_Lung_normal_B_188708715   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674315   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970549115   
SAGE_Skin_Normal_B_hs0281651708949815   
SAGE_Stomach_carcinoma_B_G18963075515   
SAGE_Universal_reference_human_RNA_CL51729415   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759615   
SAGE_Brain_glioblastoma_B_pooled56428414   
SAGE_Breast_carcinoma_CL_MDA435H4840323314   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD0109862814   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701514   
SAGE_Lymph_node_Lymphoma_B_hs0204517899337914   
SAGE_Ovary_adenocarcinoma_B_OVT-753514414   
SAGE_Ovary_cystadenoma_CL_ML10-1055144414   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016147714   
SAGE_Uterus_Normal_B_hs0194645262345514   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_medulloblastoma_B_98-13-P30145342313   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091023613   
SAGE_Breast_carcinoma_B_DCIS-460605413   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725413   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU075019513   
SAGE_Foreskin_normal_B_hs0305394035027113   
SAGE_Retina_Peripheral_normal_B_2105312713   
SAGE_Retina_macula_normal_B_HMAC2102417713   
SAGE_Skin_Normal_B_hs0277526978935213   
SAGE_Brain_glioblastoma_B_H1353124805812   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Brain_glioblastoma_B_R7099099612   
SAGE_Brain_medulloblastoma_B_98-04-P11732570212   
SAGE_Brain_meningioma_grade_II_B_SF217648711312   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081212   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881412   
SAGE_Lymph_node_Lymphoma_B_hs0196479148130212   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Prostate_normal_B_264058412   
SAGE_Skin_Cancer_B_hs0283369223923112   
SAGE_Skin_Melanoma_B_hs0273388177023412   
SAGE_Brain_astrocyte_normal_CL_NHA551481311   
SAGE_Brain_astrocytoma_grade_III_B_R927107344611   
SAGE_Brain_astrocytoma_grade_II_B_H56388568511   
SAGE_Brain_ependymoma_B_R1023122690711   
SAGE_Brain_ependymoma_B_R45551825311   
SAGE_Brain_glioblastoma_CL_stem_cells108414611   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765411   
SAGE_Brain_medulloblastoma_B_H87667404411   
SAGE_Breast_carcinoma_MD_LCIS67834411   
SAGE_Muscle_normal_B_old53889311   
SAGE_Skin_Cancer_B_hs0284389250723011   
SAGE_Vein_normal_B_hs0230675562240111   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158611   
SAGE_Bladder_Cancer_B_hs0264583396832010   
SAGE_Bladder_Cancer_B_hs0266424461223210   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937510   
SAGE_Brain_astrocytoma_grade_III_B_H27296059510   
SAGE_Brain_astrocytoma_grade_II_B_H127114489610   
SAGE_Brain_astrocytoma_grade_II_B_H518116022610   
SAGE_Brain_ependymoma_B_R35373822410   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Brain_glioblastoma_CL_28d110624610   
SAGE_Brain_medulloblastoma_B_H132259498310   
SAGE_Breast_carcinoma_B_95-25939364210   
SAGE_Breast_fibroadenoma_MD55688310   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA093846510   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747210   
SAGE_Colon_adenocarcinoma_B_Tu10255700310   
SAGE_Colon_adenocarcinoma_CL_HCT11655641310   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962510   
SAGE_Retina_Peripheral_normal_B_159661310   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Stomach_normal_MD_14S73353410   
SAGE_Vascular_endothelium_hemangioma_B_14675680410   
SAGE_Vascular_normal_CS_VEGF+57316310   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786510   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159549   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_astrocytoma_grade_II_B_H51610811659   
SAGE_Brain_ependymoma_B_R62812043169   
SAGE_Brain_medulloblastoma_B_98-09-P5588598449   
SAGE_Brain_normal_cortex_B_pool66245139   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE19201668109   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101119   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203139   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Prostate_carcinoma_CL_LNCaP6025039   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531439   
SAGE_Bladder_Cancer_B_hs024062164262528   
SAGE_Bladder_Cancer_B_hs024133358011348   
SAGE_Brain_glioblastoma_B_H11106898638   
SAGE_Brain_glioblastoma_B_H1425C8899048   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Brain_medulloblastoma_B_98-05-P0408925848   
SAGE_Brain_medulloblastoma_B_C6097461238   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Brain_meningioma_grade_I_B_SF42716925338   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802438   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900638   
SAGE_Colon_normal_B_NC14961028   
SAGE_Eye_Retinoblastoma_B_hs0389124342325038   
SAGE_Leukocytes_normal_B_14787328   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Lymph_Node_normal_B_19942648   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Prostate_normal_epithelium_CS_confluent7189738   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Urothelium_normal_B_hs023931143071358   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082737   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Brain_astrocytoma_grade_II_B_H50112830957   
SAGE_Brain_astrocytoma_grade_II_B_H53010243947   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Brain_fetal_normal_B_S1305546117   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Brain_normal_peds_cortex_B_H15717755437   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Esophagus_Normal_B_CN017563437   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Placenta_hydatidiform_mole_B_110167747   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726237   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041366   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC3142087551376   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432136   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216026   
SAGE_Prostate_normal_MD_PR3175927726   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617626   
SAGE_Brain_astrocytoma_grade_III_B_34310015835   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821465   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246585   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379325   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Placenta_normal_B_111808335   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Retina_normal_B_4cRet10370135   
SAGE_Skin_Normal_B_hs028244116361135   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371104   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568804   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_normal_CL_L154222614   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357724   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Skin_Cancer_B_hs027957032981254   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641693   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Embryo_Pre-Cancer_B_hs032468930161263   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Melanoma_B_hs027656318001043   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274222   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002181   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880130   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223140   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093850   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510