Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: AAAAATTGGA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016563466   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A1537951452   
SAGE_White_Blood_Cells_monocyte_normal_AP_P11011582447   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P2502971247   
SAGE_Breast_normal_epithelium_CD44+_AP_N2560081346   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC3524781245   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+615191239   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430838   
SAGE_Breast_normal_epithelium_CD44+_AP_N5804641537   
SAGE_Breast_normal_epithelium_MUC1+_AP_N15717041336   
SAGE_Breast_normal_stroma_B_IDC850485831   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872830   
SAGE_White_Blood_Cells_monocyte_normal_AP_A1999131530   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426829   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634727   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691026   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987861224   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399423   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS666176721   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227820   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS681452819   
SAGE_Peritoneum_mesothelioma_B_1232529318   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS665314618   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656832517   
SAGE_Breast_normal_FS_NER34565317   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023517   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003741316   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729416   
SAGE_Urothelium_normal_B_hs0239311430726116   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548615   
SAGE_Brain_astrocytoma_grade_II_B_H516108116814   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Lymph_node_Lymphoma_B_hs0204517899337614   
SAGE_Brain_medulloblastoma_B_98-13-P30145342313   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956413   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147513   
SAGE_Ovary_endometriosis_CL_E1276097513   
SAGE_Brain_astrocytoma_grade_III_B_439107824712   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N581100786467512   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091412   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539412   
SAGE_Colon_normal_B_NC149610312   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684835812   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024411   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS789184511   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132311   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512311   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006411   
SAGE_Lung_adenocarcinoma_B_136256211   
SAGE_Bone_Marrow_Normal_FS_hs0404484254724810   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970532410   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Skin_Melanoma_B_hs0275412822121610   
SAGE_Brain_astrocytoma_grade_III_B_H105510988659   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765489   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287359   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938828   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341038   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Prostate_normal_epithelium_CS_senescent7171738   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082737   
SAGE_Brain_ependymoma_B_R4555182527   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274697   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878537   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Esophagus_Dysplasia_B_HGD027861137   
SAGE_GallBladder_Adenocarcinoma_B_C018138037   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_Bladder_Cancer_B_hs024062164261906   
SAGE_Bladder_Cancer_B_hs026642446121306   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_astrocytoma_grade_III_B_H2729605936   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Brain_fetal_normal_B_S1305546106   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002936   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Skin_Melanoma_B_hs027338817701236   
SAGE_Bladder_Cancer_B_hs026546401981355   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_astrocytoma_grade_II_B_H53010243935   
SAGE_Brain_glioblastoma_B_R2010105335   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601245   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831935   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Prostate_normal_epithelium_CS_confluent7189725   
SAGE_Skin_Normal_B_hs027243975501185   
SAGE_Skin_Normal_B_hs028165170891875   
SAGE_Skin_normal_B_NS3661515   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_ependymoma_B_R102312269034   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Embryo_Pre-Cancer_B_hs032468930161414   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821454   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535354   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Cancer_B_hs02843892507844   
SAGE_Skin_Melanoma_B_hs02743895211964   
SAGE_Brain_astrocytoma_grade_III_B_R92710734423   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_astrocytoma_grade_II_B_H35910576423   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604803   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755763   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246553   
SAGE_Foreskin_normal_B_hs03053940350783   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_normal_B_26405813   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Cancer_B_hs02803618498563   
SAGE_Skin_Cancer_B_hs02833692239603   
SAGE_Skin_Normal_B_hs027158076861143   
SAGE_Skin_Normal_B_hs027752697891023   
SAGE_Skin_Normal_B_hs02783042221463   
SAGE_Skin_Normal_B_hs02824411636743   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Vein_normal_B_hs023067556221253   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775712   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083442   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vein_normal_B_hs02376135688872   
SAGE_Bladder_Cancer_B_hs02413335801191   
SAGE_Bladder_Cancer_B_hs02645833968351   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880631   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223751   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Eye_Retinoblastoma_B_hs0389124342321181   
SAGE_Lymph_node_Lymphoma_B_hs01964791481361   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Melanoma_B_hs02765631800421   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Uterus_Normal_B_hs01946452623531   
SAGE_Uterus_normal_B_hs01953718463371   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741050   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091040   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143220   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Skin_Cancer_B_hs02795703298140   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161220   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490130