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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabrp, gamma-aminobutyric acid (GABA) A receptor, pi
Sequence ID:NM_146017
Entrez Gene ID:216643
Ensembl ID:ENSMUSG00000020159

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 33550780 - 33578957

NM_146017 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
120623345078033452841
206322503345429333454480
225124033345496733455119
240425413345692933457066
254226243346386533463947
262528423346721233467429
284329103346806633468133
291130293347237233472490
303031283347331733473415
312932803347880533478956

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3602400Full LengthBC027245gamma-aminobutyric acid (GABA-A) receptor, pi
5059564Full LengthBC031196gamma-aminobutyric acid (GABA-A) receptor, pi
5320737Full LengthBC025550gamma-aminobutyric acid (GABA-A) receptor, pi
5344479Full LengthBC023693gamma-aminobutyric acid (GABA-A) receptor, pi
5325114IncompleteBC027839gamma-aminobutyric acid (GABA-A) receptor, pi

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666129  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_146017 NP_666129 Q8QZW7 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC023693 AAH23693 Q8QZW7
BC025550 AAH25550 Q8QZW7
BC027245 AAH27245 Q8QZW7
BC027839 AAH27839 Q8K367
BC031196 AAH31196 Q8QZW7
AK028946 BAC26209 Q8QZW7
AK160577 BAE35885 Q8QZW7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabrp NP_666129 R.norvegicus Gabrp 81658   NP_112291 98
H.sapiens GABRP 2568 Gene Info NP_055026 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)