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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cst11, cystatin 11
Sequence ID:NM_030059
Entrez Gene ID:78240
Ensembl ID:ENSMUSG00000036958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 148768617 - 148771497

NM_030059 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1179148594353148594531
180284148596118148596222
285606148596911148597232

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30920256Full LengthBC100526cystatin 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084335  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030059 NP_084335 Q9D269
Q7M731
Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC100526 AAI00527 Q9D269
Q7M731
AF454373 AAL51004 Q9D269
Q7M731
AK020300 BAB32061 Q9D269
Q7M731
BK001265 DAA01199 Q7M731

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cst11 NP_084335 R.norvegicus Cst11 245916   NP_620785 82
H.sapiens CST11 140880 Gene Info NP_570612 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)