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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Svs2, seminal vesicle secretory protein 2
Sequence ID:NM_017390
Entrez Gene ID:53878
Ensembl ID:ENSMUSG00000040132

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H3|2 80.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 164236062 - 164237701

NM_017390 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1304164061664164061967
3051399164062553164063647
14001570164063906164064076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40052650Full LengthBC107275seminal vesicle secretory protein 2
40052651IncompleteBC107276seminal vesicle secretory protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059086  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017390 NP_059086 Q8CBV5 Semenogelin

Related Sequences

 
mRNAGenPeptSwissProt
BC107275 AAI07276 Q8BS30
BC107276 AAI07277 Q3B802
AK035204 BAC28978 Q8CBV5
AK040724 BAC30684 Q8BS30
AK090151 BAC41114 Q8C1W4
AK144285 BAE25815 Q8BS30
AK144389 BAE25862 Q3UN62
AK144429 BAE25885 Q3UN62
AK144524 BAE25925 Q8BS30
AK165704 BAE38345 Q8BS30
AK165713 BAE38351 Q8BS30
AK165727 BAE38356 Q8BS30
AK165753 BAE38366 Q8BS30
AK165825 BAE38397 Q8BS30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Svs2 NP_059086 R.norvegicus Semg1 25013   NP_036842 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)