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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarcad1, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Sequence ID:NM_007958
NM_001253392
Entrez Gene ID:13990
Ensembl ID:ENSMUSG00000029920

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C1|6 29.69

Chromosomal Position (from UCSC)

Chromosomal Position:6: 65042835 - 65044201


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3980726Full LengthBC042442SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031984  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001253392 NP_001240321      
NM_007958 NP_031984 Q04692 EC 3.6.4.12 SNF2_N
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC042442 AAH42442 Q04692 EC 3.6.4.12
AK122454 BAC65736 Q04692 EC 3.6.4.12
AK134442 BAE22146 Q04692 EC 3.6.4.12
AK147884 BAE28202 Q04692 EC 3.6.4.12
X69942 CAA49560 Q04692 EC 3.6.4.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcad1 NP_031984 R.norvegicus Smarcad1 312398   NP_001101334 97
H.sapiens SMARCAD1 56916 Gene Info NP_064544 93
A.gambiae AgaP_AGAP009980 1279402   XP_319118 44
D.melanogaster CG5899 34311   NP_609320 44
S.pombe fft2 2539045   NP_587731 44
S.pombe fft3 2541531   NP_593617 42
S.pombe fft1 2541983   NP_593325 41
C.elegans helicase 176462   NP_499301 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)