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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pcyt1a, phosphate cytidylyltransferase 1, choline, alpha isoform
Sequence ID:NM_001163159
NM_001163160
NM_009981
Entrez Gene ID:13026
Ensembl ID:ENSMUSG00000005615

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16 22.85 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 32430995 - 32472015

 Exon Info From UCSC:
NM_001163159
NM_001163160
NM_009981

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4162053Full LengthBC018313phosphate cytidylyltransferase 1, choline, alpha isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034111  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001163159 NP_001156631      
NM_001163160 NP_001156632      
NM_009981 NP_034111 P49586 EC 2.7.7.15 CTP_transf_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L28956 AAA53526 P49586 EC 2.7.7.15
BC018313 AAH18313 P49586 EC 2.7.7.15
AK076050 BAC36148 P49586 EC 2.7.7.15
AK076830 BAC36497 P49586 EC 2.7.7.15
AK168266 BAE40214 Q3THI2  
Z12302 CAA78172 P49586 EC 2.7.7.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pcyt1a NP_034111 R.norvegicus Pcyt1a 140544   NP_511177 99
H.sapiens PCYT1A 5130 Gene Info NP_005008 96
D.melanogaster Cct2 38180   NP_647622 61
D.melanogaster Cct1 117353   NP_647621 60
A.gambiae AgaP_AGAP002263 1269296   XP_307918 54
C.elegans F08C6.2 181021   NP_001033539 53
C.elegans Y18H1A.11 353380   NP_871893 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)