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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. S1pr1, sphingosine-1-phosphate receptor 1
Sequence ID:NM_007901
Entrez Gene ID:13609
Ensembl ID:ENSMUSG00000045092

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 115710438 - 115715047

NM_007901 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22682115413351115416031
26833029115417626115417972

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6415920Full LengthBC049094sphingosine-1-phosphate receptor 1
6494262Full LengthBC051023sphingosine-1-phosphate receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031927  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007901 NP_031927 O08530 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC049094 AAH49094 O08530
BC051023 AAH51023 O08530
AK004591 BAB23393 O08530
AK082672 BAC38569 Q8C4A3
AK138316 BAE23622 Q3UUK3
AK146501 BAE27216 O08530

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus S1pr1 NP_031927 R.norvegicus S1pr1 29733   NP_058997 99
H.sapiens S1PR1 1901 Gene Info NP_001391 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta