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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Itgb6, integrin beta 6
Sequence ID:NM_001159564
NM_021359
Entrez Gene ID:16420
Ensembl ID:ENSMUSG00000026971

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2 34.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 60600484 - 60676066

 Exon Info From UCSC:
NM_001159564
NM_021359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6475423Full LengthBC049185integrin beta 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067334  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159564 NP_001153036    
NM_021359 NP_067334 Q9Z0T9 Integrin_beta
Integrin_B_tail
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
AF115376 AAD17212 Q9Z0T9
BC049185 AAH49185 Q9Z0T9
AK019511 BAB31769 Q9D2L4
AK036439 BAC29430 Q9Z0T9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itgb6 NP_067334 R.norvegicus Itgb6 311061   NP_001004263 96
H.sapiens ITGB6 3694 Gene Info NP_000879 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)