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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pmm2, phosphomannomutase 2
Sequence ID:NM_016881
Entrez Gene ID:54128
Ensembl ID:ENSMUSG00000022711

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 8637706 - 8657524

NM_016881 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112286377998637920
12323486428308642941
23531186454618645537
31240386462658646356
40450386487408648839
50457986489748649049
58069586515028651617
69683386556438655780
834180286566488657616

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4238664Full LengthBC094448phosphomannomutase 2
6395635Full LengthBC046325phosphomannomutase 2
5352533IncompleteBC037101phosphomannomutase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058577  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016881 NP_058577 Q545N8
Q9Z2M7
EC 5.4.2.8 PMM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF043514 AAD02276 Q545N8
Q9Z2M7
EC 5.4.2.8
BC046325 AAH46325 Q545N8
Q9Z2M7
EC 5.4.2.8
BC094448 AAH94448 Q545N8
Q9Z2M7
EC 5.4.2.8
AK002858 BAB22411 Q9DCE3  
AK003334 BAB22722 Q9D1M5  
AK005074 BAB23798 Q545N8
Q9Z2M7
EC 5.4.2.8
AK012683 BAB28409 Q9CZE9  
AK134850 BAE22311 Q545N8
Q9Z2M7
EC 5.4.2.8
AK145402 BAE26415 Q545N8
Q9Z2M7
EC 5.4.2.8
AK149116 BAE28741 Q545N8
Q9Z2M7
EC 5.4.2.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pmm2 NP_058577 R.norvegicus Pmm2 302915   NP_001100443 97
H.sapiens PMM2 5373 Gene Info NP_000294 92
A.thaliana PMM 819187   NP_182103 61
A.gambiae AgaP_AGAP011353 1270587   XP_309297 60
S.cerevisiae SEC53 850499   NP_116609 59
S.pombe pmm1 2541674   NP_594325 58
N.crassa NCU02829 3879935   XP_963786 57
C.elegans F52B11.2 178364   NP_502698 56
D.melanogaster CG10688 39436   NP_648589 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)