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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cxxc5, CXXC finger 5
Sequence ID:NM_133687
Entrez Gene ID:67393
Ensembl ID:ENSMUSG00000046668

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18|18 B3

Chromosomal Position (from UCSC)

Chromosomal Position:18: 35829787 - 35860890

NM_133687 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11693598947135989639
17012333601804636019109
123422723602030336021341

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4912395Full LengthBC016207CXXC finger 5
30541251Full LengthBC089314CXXC finger 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598448  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133687 NP_598448 Q91WA4 zf-CXXC

Related Sequences

 
mRNAGenPeptSwissProt
BC016207 AAH16207 Q91WA4
BC089314 AAH89314 Q91WA4
AK005364 BAC25113 Q91WA4
AK015150 BAC25458 Q91WA4
AK132950 BAE21439 Q91WA4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxxc5 NP_598448 R.norvegicus Cxxc5 291670   NP_001007629 98
H.sapiens CXXC5 51523 Gene Info NP_057547 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)