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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Foxa2, Forkhead box A2
Sequence ID:NM_010446
Entrez Gene ID:15376
Ensembl ID:ENSMUSG00000037025

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2 84.0

Chromosomal Position (from UCSC)

Chromosomal Position:2: 148043516 - 148045895

NM_010446 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11947147868613147870559
19482017147871562147871631
20182127147872595147872704

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064119Full LengthBC160375forkhead box A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034576  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010446 NP_034576 P35583 Fork_head
Fork_head_N

Related Sequences

 
mRNAGenPeptSwissProt
L10409 AAA03161 P35583
U04197 AAA03606 P35583
BC160375 AAI60375  
X74937 CAA52891 P35583

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Foxa2 NP_034576 H.sapiens FOXA2 3170 Gene Info NP_068556 98
R.norvegicus Foxa2 25099   NP_036875 98
D.melanogaster fkh 43383   NP_001163762 49
A.gambiae AgaP_AGAP001671 1281503   XP_321425 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)