Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Socs6, suppressor of cytokine signaling 6
Sequence ID:NM_018821
Entrez Gene ID:54607
Ensembl ID:ENSMUSG00000056153

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E4|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 88868953 - 88887287

NM_018821 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130398903727189040309
304031648905660089056724
316532108906355389063598

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4017254Full LengthBC094443suppressor of cytokine signaling 6
4482828Full LengthBC017597suppressor of cytokine signaling 6
30444479Full LengthBC085245suppressor of cytokine signaling 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061291  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018821 NP_061291 Q9JLY0 SH2
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
AF121907 AAF28872 Q9JLY0
BC017597 AAH17597 Q9JLY0
BC085245 AAH85245 Q5U469
BC094443 AAH94443 Q9JLY0
AK019993 BAB31956 Q9JLY0
AK028665 BAC26055 Q9JLY0
AK028701 BAC26074 Q9JLY0
AK031164 BAC27287 Q9JLY0
AK031929 BAC27607 Q8CCY3
AK044946 BAC32154 Q9JLY0
AK142069 BAE24930 Q9JLY0
AK156591 BAE33770 Q9JLY0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Socs6 NP_061291 R.norvegicus Socs6 307200   XP_225667 99
H.sapiens SOCS6 9306 Gene Info NP_004223 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)