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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Crym, crystallin, mu
Sequence ID:NM_016669
Entrez Gene ID:12971
Ensembl ID:ENSMUSG00000030905

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F2|7 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 120186383 - 120201988

NM_016669 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1315127329897127330211
316400127333239127333323
401522127333965127334086
523706127338838127339021
707808127341163127341264
809871127342761127342823
8721022127344590127344740
10231256127345268127345501

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6492374Full LengthBC045159crystallin, mu

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057878  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016669 NP_057878 Q3UPX0
O54983
EC 1.5.1.25 OCD_Mu_crystall

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF039391 AAB94770 Q3UPX0
O54983
EC 1.5.1.25
BC045159 AAH45159 Q3UPX0
O54983
EC 1.5.1.25
AK138422 BAE23654 Q3UPX0
O54983
EC 1.5.1.25
AK143116 BAE25274 Q3UPX0
O54983
EC 1.5.1.25
AK163781 BAE37489 Q3UPX0
O54983
EC 1.5.1.25

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Crym NP_057878 H.sapiens CRYM 1428 Gene Info NP_001879 89
D.melanogaster CG4872 32676   NP_573173 37
A.gambiae AgaP_AGAP011137 1270790   XP_309511 35
A.thaliana AT5G52810 835358   NP_200093 34
S.pombe SPAP11E10.01 2541644   NP_593514 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)