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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slc16a1, solute carrier family 16 (monocarboxylic acid transporters), member 1
Sequence ID:NM_009196
Entrez Gene ID:20501
Ensembl ID:ENSMUSG00000032902

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 104638683 - 104657237

NM_009196 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1161104442590104442750
162421104453180104453439
422565104454808104454951
5661411104456664104457509
14124426104459370104462384

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3499773Full LengthBC014777solute carrier family 16 (monocarboxylic acid transporters), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033222  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009196 NP_033222 Q544N9
P53986
MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
AF058055 AAC13720 Q544N9
P53986
BC014777 AAH14777 Q544N9
P53986
AK033516 BAC28335 Q544N9
P53986
AK053421 BAC35381 Q8BPS5
AK079379 BAC37626 Q8C571
AK088762 BAC40553 Q8C2E6
AK136198 BAE22870 Q3UWP4
AK161701 BAE36539 Q544N9
P53986
AK162682 BAE37020 Q3TRK9
AK166606 BAE38889 Q544N9
P53986
AK167711 BAE39755 Q3TIU1
X82438 CAA57819 Q544N9
P53986

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc16a1 NP_033222 R.norvegicus Slc16a1 25027   NP_036848 95
H.sapiens SLC16A1 6566 Gene Info NP_003042 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)