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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ephx1, epoxide hydrolase 1, microsomal
Sequence ID:NM_010145
Entrez Gene ID:13849
Ensembl ID:ENSMUSG00000038776

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H4|1 98.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 181001969 - 181017540

NM_010145 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
44468182919686182920110
469594182920523182920648
595703182922063182922171
704912182924009182924217
9131042182924758182924887
10431270182926079182926306
12711451182929853182930033
14521639182931929182932116
16401708182947557182947625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3491966Full LengthBC029636epoxide hydrolase 1, microsomal
4488885Full LengthBC061493epoxide hydrolase 1, microsomal
4986422Full LengthBC045194epoxide hydrolase 1, microsomal
5067895Full LengthBC057857epoxide hydrolase 1, microsomal

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034275  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_010145 NP_034275 Q9D379 EC 3.3.2.9 Abhydrolase_1
EHN

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U89491 AAB49762 Q9D379 EC 3.3.2.9
BC029636 AAH29636 Q8K2W5  
BC045194 AAH45194 Q9D379 EC 3.3.2.9
BC057857 AAH57857 Q6PEV0  
BC061493 AAH61493 Q9D379 EC 3.3.2.9
AK018249 BAB31132 Q9D379 EC 3.3.2.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ephx1 NP_034275 R.norvegicus Ephx1 25315   NP_001029262 95
H.sapiens EPHX1 2052 Gene Info NP_000111 84
C.elegans W01A11.1 179036   NP_504650 48
D.melanogaster Jheh1 251984   NP_611385 44
N.crassa NCU08783 3872384   XP_956226 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta