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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ube3a, ubiquitin protein ligase E3A
Sequence ID:NM_173010
NM_001033962
NM_011668
Entrez Gene ID:22215
Ensembl ID:ENSMUSG00000025326

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 28.65 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 59288406 - 59305526

 Exon Info From UCSC:
NM_173010
NM_001033962
NM_011668

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40110636Full LengthBC131658ubiquitin protein ligase E3A
40110637Full LengthBC131659ubiquitin protein ligase E3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766598  NP_035798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033962 NP_001029134    
NM_011668 NP_035798   HECT
NM_173010 NP_766598 Q8CE29 HECT

Related Sequences

 
mRNAGenPeptSwissProt
U82122 AAB47756 O08759
U96636 AAB63361 O08759
BC131658 AAI31659 Q8CE29
BC131659 AAI31660 Q8CE29
AK029133 BAC26314 Q8CE29
AK080807 BAC38028 Q8BNS1
AK220549 BAD90321 Q5DTH1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ube3a NP_035798 R.norvegicus Ube3a 361585   XP_341868 98
H.sapiens UBE3A 7337 Gene Info NP_570854 96
A.gambiae AgaP_AGAP012366 3291570   XP_551819 52
D.melanogaster Ube3a 39266   NP_648452 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)