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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clcn6, chloride channel 6
Sequence ID:NM_011929
Entrez Gene ID:26372
Ensembl ID:ENSMUSG00000029016

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E1|4 76.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 148015351 - 148024148

 Exon Info From UCSC:
NM_011929

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015283BC148372chloride channel 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036059  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011929 NP_036059 Q3UM91
O35454
CBS
Voltage_CLC

Related Sequences

 
mRNAGenPeptSwissProt
BC148372 AAI48373  
AK045787 BAC32492 Q8BR31
AK220319 BAD90234 Q5DU51
AK145053 BAE26207 Q3UM91
O35454

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clcn6 NP_036059 R.norvegicus Clcn6 295586   NP_001099949 99
H.sapiens CLCN6 1185 Gene Info NP_001277 97
A.thaliana CLC-D 832693   NP_197996 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)