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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r49, vomeronasal 1, receptor 49
Sequence ID:NM_011911
Entrez Gene ID:24112
Ensembl ID:ENSMUSG00000095932

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6 37.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 90072085 - 90073018

NM_011911 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19339002207990023011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014283BC140238vomeronasal 1, receptor B2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036041  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011911 NP_036041 Q9WUF1 V1R

Related Sequences

 
mRNAGenPeptSwissProt
AF132114 AAD28626 Q9WUF1
BC140238 AAI40239  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r49 NP_036041 M.musculus Vmn1r44 113854 Gene Info NP_444457 83
M.musculus Vmn1r40 113855 Gene Info NP_444458 82
M.musculus Vmn1r50 113852 Gene Info NP_444455 81
M.musculus Vmn1r53 113853 Gene Info NP_444456 80
M.musculus Vmn1r239-ps 100504631   XP_003085359 80
M.musculus Vmn1r41 113857 Gene Info NP_444460 80
M.musculus Vmn1r46 113856 Gene Info NP_444459 77
R.norvegicus Vom1r101 286892   NP_775135 75
R.norvegicus Vom1r96 494275   NP_001008927 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)