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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nkx2-1, NK2 homeobox 1
Sequence ID:NM_001146198
NM_009385
Entrez Gene ID:21869
Ensembl ID:ENSMUSG00000001496

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C1-C3|12 28.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56533034 - 56535060

 Exon Info From UCSC:
NM_001146198
NM_009385

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6416507Full LengthBC057607NK2 homeobox 1
30363051Full LengthBC080868NK2 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033411  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146198 NP_001139670    
NM_009385 NP_033411 Q6PFE0
P50220
Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC057607 AAH57607 Q6PFE0
BC080868 AAH80868 P50220

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nkx2-1 NP_001139670 R.norvegicus Nkx2-1 25628   NP_037225 99
H.sapiens NKX2-1 7080 Gene Info NP_001073136 98
D.melanogaster scro 3355151   NP_001015473 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)