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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdc27, cell division cycle 27
Sequence ID:NM_145436
Entrez Gene ID:217232
Ensembl ID:ENSMUSG00000020687

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11 63.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 104522722 - 104550415

 Exon Info From UCSC:
NM_145436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9054386Full LengthBC172100cell division cycle 27 homolog (S. cerevisiae)
9088128Full LengthBC157955cell division cycle 27 homolog (S. cerevisiae)
100063889Full LengthBC160241cell division cycle 27 homolog (S. cerevisiae)
2609242IncompleteBC040245cell division cycle 27 homolog (S. cerevisiae)
5352301IncompleteBC023730cell division cycle 27 homolog (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145436 NP_663411 A2A6Q5  

Related Sequences

 
mRNAGenPeptSwissProt
BC023187 AAH23187 Q8R568
BC157955 AAI57956 A2A6Q5
BC160241 AAI60241  
BC172100 AAI72100 A2A6Q5
AK039377 BAC30331 Q8BYJ1
AK134425 BAE22139 Q3UYS3
AK161143 BAE36213 Q3TTW1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdc27 NP_663411 R.norvegicus Cdc27 360643   NP_001019964 98
H.sapiens CDC27 996 Gene Info NP_001247 97
A.gambiae AgaP_AGAP007690 1269539   XP_308181 46
D.melanogaster Cdc27 38798   NP_648093 45
S.pombe nuc2 2542438   NP_594604 39
A.thaliana HBT 816519   NP_849994 36
N.crassa NCU00213 3872745   XP_956598 35
S.cerevisiae CDC27 852194   NP_009469 33
C.elegans mat-1 172145   NP_001021714 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)