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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snx9, sorting nexin 9
Sequence ID:NM_025664
Entrez Gene ID:66616

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A1|17 3.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 5926102 - 5931954

 Exon Info From UCSC:
NM_025664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257422Full LengthBC014814sorting nexin 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079940  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025664 NP_079940 Q91VH2
Q3U1P2
SH3_1
PX

Related Sequences

 
mRNAGenPeptSwissProt
BC014814 AAH14814 Q91VH2
Q3U1P2
AK012520 BAB28292 Q9CZK0
AK149849 BAE29121 Q91VH2
Q3U1P2
AK155830 BAE33453 Q91VH2
Q3U1P2
AK157517 BAE34110 Q3TZU7
AK170339 BAE41729 Q91VH2
Q3U1P2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snx9 NP_079940 H.sapiens SNX9 51429 Gene Info NP_057308 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)