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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptafr, platelet-activating factor receptor
Sequence ID:NM_001081211
Entrez Gene ID:19204
Ensembl ID:ENSMUSG00000056529

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4 62.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 132579328 - 132579943

NM_001081211 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1208132119981132120188
2091820132135169132136780

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064105Full LengthBC160361platelet-activating factor receptor

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081211 NP_001074680 Q62035  

Related Sequences

 
mRNAGenPeptSwissProt
AF004858 AAC53357 O35159
BC160361 AAI60361 Q62035
AK032547 BAC27919 Q62035

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptafr NP_001074680 R.norvegicus Ptafr 58949   NP_445773 91
H.sapiens PTAFR 5724 Gene Info NP_001158195 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)