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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Glra1, Glycine receptor, alpha 1 subunit
Sequence ID:NM_020492
Entrez Gene ID:14654
Ensembl ID:ENSMUSG00000000263

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 30.0

Chromosomal Position (from UCSC)

Chromosomal Position:11: 55608072 - 55608657

NM_020492 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12915532831455328604
2924385533442355334569
4396535534075655340970
6547915534578555345922
7928745534732555347407
87510985534978255350005
109911665537971055379777
116712945538778355387910
129514075542117955421291

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860744Full LengthBC137725glycine receptor, alpha 1 subunit
40130226Full LengthBC131949glycine receptor, alpha 1 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065238  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020492 NP_065238 Q5NCT9 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
S73717 AAB32157 Q64018
S73718 AAB32158 Q64018
BC131949 AAI31950 Q5NCT9
BC137725 AAI37726 Q5NCT9
AY129229 AAM97291 Q5NCT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Glra1 NP_065238 R.norvegicus Glra1 25674   NP_037265 100
H.sapiens GLRA1 2741 Gene Info NP_001139512 99
C.elegans glc-3 178930   NP_504441 51
C.elegans avr-14 172270   NP_001020963 45
D.melanogaster GluClalpha 42350   NP_001014641 43
C.elegans avr-15 179834   NP_001024076 42
A.gambiae AgaP_AGAP001434 4577187   XP_321696 41
C.elegans glc-1 180086   NP_507090 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)