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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Casp9, caspase 9
Sequence ID:NM_015733
Entrez Gene ID:12371
Ensembl ID:ENSMUSG00000028914

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E1|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 141793854 - 141813687

NM_015733 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1375141349526141349900
376775141352349141352748
776810141359735141359769
811987141361276141361452
9881077141361744141361833
10781225141363029141363176
12261405141367453141367632
14061515141368121141368230
15163896141369509141371889

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5721188Full LengthBC056447caspase 9
6834067Full LengthBC056372caspase 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056548  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015733 NP_056548 Q8C3Q0
Q8C3Q9
CARD
Peptidase_C14

Related Sequences

 
mRNAGenPeptSwissProt
BC056372 AAH56372 Q8C3Q0
Q8C3Q9
BC056447 AAH56447 Q8C3Q0
Q8C3Q9
AB019600 BAA86895 Q9R0T0
AB019601 BAA86896 Q9R0S9
AK085095 BAC39365 Q8C3Q0
Q8C3Q9
AK085152 BAC39378 Q8C3Q0
Q8C3Q9
AK156500 BAE33734 Q3TRE1
AK162863 BAE37089 Q3TRE1
CT010400 CAJ18606 Q4FJK5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Casp9 NP_056548 R.norvegicus Casp9 58918   NP_113820 91
H.sapiens CASP9 842 Gene Info NP_001220 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta