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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gfra1, glial cell line derived neurotrophic factor family receptor alpha 1
Sequence ID:NM_010279
Entrez Gene ID:14585
Ensembl ID:ENSMUSG00000025089

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D2-D3|19 29.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 58238383 - 58454349

NM_010279 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
8219365831118158313035
193719905831374358313796
199121725833840158338582
217323075834148858341622
230824175834454358344652
241827545837473158375067
275527695846706258467076
277028535852645858526541
285431475852765358527946
314833055852879858528955

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6390018Full LengthBC054378glial cell line derived neurotrophic factor family receptor alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034409  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010279 NP_034409 P97785 GDNF

Related Sequences

 
mRNAGenPeptSwissProt
AF012811 AAB65855 Q9QWK2
AF015172 AAB86600 P97785
BC054378 AAH54378 P97785
AB000800 BAA19185 P97785

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gfra1 NP_034409 R.norvegicus Gfra1 25454   NP_037091 98
H.sapiens GFRA1 2674 Gene Info NP_005255 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)