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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cxcl10, chemokine (C-X-C motif) ligand 10
Sequence ID:NM_021274
Entrez Gene ID:15945
Ensembl ID:ENSMUSG00000034855

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E2|5 53.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 92346743 - 92348850

NM_021274 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17459277566692776410
7468359277683092776919
8369629277711492777240
96310639277777992777879

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1446589Full LengthBC030067chemokine (C-X-C motif) ligand 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067249  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021274 NP_067249 Q548V9
P17515
IL8

Related Sequences

 
mRNAGenPeptSwissProt
M33266 AAA02968 Q548V9
P17515
M86829 AAA21489 Q548V9
P17515
AF227743 AAG10400 Q548V9
P17515
BC030067 AAH30067 Q548V9
P17515
AK144279 BAE25810 Q548V9
P17515
AK146144 BAE26931 Q3UK71
AK150380 BAE29511 Q3UCV1
AK150765 BAE29832 Q548V9
P17515
AK151210 BAE30205 Q548V9
P17515
AK151248 BAE30238 Q3UAS6
AK151415 BAE30380 Q548V9
P17515
AK151534 BAE30481 Q548V9
P17515
AK152568 BAE31320 Q548V9
P17515
AK152814 BAE31517 Q548V9
P17515
AK152924 BAE31599 Q3U6X5
AK153181 BAE31783 Q548V9
P17515
AK157130 BAE33973 Q548V9
P17515
AK157139 BAE33975 Q548V9
P17515
AK157589 BAE34130 Q548V9
P17515
AK157678 BAE34149 Q548V9
P17515
AK172540 BAE43058 Q548V9
P17515

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcl10 NP_067249 R.norvegicus Cxcl10 245920   NP_620789 78
H.sapiens CXCL10 3627 Gene Info NP_001556 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)