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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacng5, calcium channel, voltage-dependent, gamma subunit 5
Sequence ID:NM_080644
NM_001199301
Entrez Gene ID:140723
Ensembl ID:ENSMUSG00000040373

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 107877351 - 107884541

Transcript StartTranscript EndChromosomal Start Chromosomal End
13005107735918107738922
30063151107739208107739353
31523292107742910107743050
32933379107744202107744288
33803615107745659107745894
36163678107772613107772675

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40061528Full LengthBC120894calcium channel, voltage-dependent, gamma subunit 5
40061535Full LengthBC120895calcium channel, voltage-dependent, gamma subunit 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542375  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199301 NP_001186230    
NM_080644 NP_542375 Q544Q4
Q8VHW4
PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC120894 AAI20895 Q544Q4
BC120895 AAI20896 Q544Q4
AF361347 AAL50042 Q544Q4
Q8VHW4
AF458900 AAM00597 Q8R4I0
AK032260 BAC27783 Q544Q4
Q8VHW4
AK032548 BAC27920 Q544Q4
Q8VHW4
AK034065 BAC28568 Q544Q4
Q8VHW4
AK080762 BAC38012 Q544Q4
Q8VHW4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacng5 NP_542375 R.norvegicus Cacng5 140726   NP_542424 100
H.sapiens CACNG5 27091 Gene Info NP_665810 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)