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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cactin, cactin, spliceosome C complex subunit
Sequence ID:NM_027381
Entrez Gene ID:70312
Ensembl ID:ENSMUSG00000034889

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 81323751 - 81326238

NM_027381 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13448078384780784190
3459128078518280785749
91310588078586580786010
105912218078636380786525
122213368078665480786768
133715298078704780787239
153016498078761380787732
165019368078783480788120
193727248078820880788995

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087899Full LengthBC150986RIKEN cDNA 2510012J08 gene
9088069Full LengthBC151180RIKEN cDNA 2510012J08 gene
5344831IncompleteBC023696RIKEN cDNA 2510012J08 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027381 NP_081657 Q9CS00  

Related Sequences

 
mRNAGenPeptSwissProt
BC150986 AAI50987 A1L013
BC151180 AAI51181 A1L013
AY934504 AAY17367 A1L013
Q9CS00
AK010963 BAB27295 Q9CS00

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2510012J08Rik NP_081657 R.norvegicus RGD1563634 500790   NP_001074916 96
H.sapiens C19orf29 58509 Gene Info NP_001074012 88
A.gambiae AgaP_AGAP006542 1277141   XP_316580 56
D.melanogaster cactin 33043   NP_523422 53
A.thaliana AT1G03910 839371   NP_171887 43
C.elegans cacn-1 175066   NP_496951 42
N.crassa NCU08633 3880974   XP_964841 42
S.pombe SPBC2F12.12c 2540353   NP_595704 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)