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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cul1, cullin 1
Sequence ID:NM_012042
Entrez Gene ID:26965
Ensembl ID:ENSMUSG00000029686

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 B3

Chromosomal Position (from UCSC)

Chromosomal Position:6: 47484859 - 47525634

 Exon Info From UCSC:
NM_012042

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2812400Full LengthBC029260cullin 1
2651235IncompleteBC004836cullin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036172  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012042 NP_036172 Q9WTX6 Cullin

Related Sequences

 
mRNAGenPeptSwissProt
AF083216 AAD16038 Q9WTX6
AF136441 AAD34471 Q9WTX6
AF176910 AAD52657 Q9WTX6
BC004836 AAH04836 Q05DR6
BC029260 AAH29260 Q9WTX6
AK040053 BAC30502  
AK044707 BAC32043 Q8C8Q1
AK147004 BAE27601 Q3UIA5
AK164274 BAE37713 Q3TPM3
XM_003945405 XP_003945454  
XM_003946187 XP_003946236  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cul1 NP_036172 H.sapiens CUL1 8454 Gene Info NP_003583 100
R.norvegicus Cul1 362356   NP_001102097 100
A.gambiae AgaP_AGAP008007 1277942   XP_317457 73
D.melanogaster lin19 35742   NP_523655 65
N.crassa NCU05204 3878342   XP_962203 51
C.elegans cul-1 176466   NP_499309 47
S.pombe cul1 2542393   NP_594259 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta