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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Catsper1, cation channel, sperm associated 1
Sequence ID:NM_139301
Entrez Gene ID:225865
Ensembl ID:ENSMUSG00000038498

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 5335740 - 5344153

 Exon Info From UCSC:
NM_139301

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015059Full LengthBC146511cation channel, sperm associated 1
100014385BC140372cation channel, sperm associated 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_647462  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139301 NP_647462 Q91ZR5 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC140372 AAI40373  
BC146511 AAI46512  
AF407332 AAL14104 Q91ZR5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Catsper1 NP_647462 R.norvegicus Catsper1 689349   XP_001070492 77
H.sapiens CATSPER1 117144 Gene Info NP_444282 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)