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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rabggta, Rab geranylgeranyl transferase, a subunit
Sequence ID:NM_019519
Entrez Gene ID:56187
Ensembl ID:ENSMUSG00000040472

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C3|14 20.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 55715876 - 55722176

 Exon Info From UCSC:
NM_019519

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3967218Full LengthBC012214Rab geranylgeranyl transferase, a subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062392  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019519 NP_062392 Q9JHK4 EC 2.5.1.60 LRR_1
PPTA
RabGGT_insert

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF127656 AAF65920 Q9JHK4 EC 2.5.1.60
AF127658 AAF65921 Q9JHK4 EC 2.5.1.60
AF127659 AAF65922 Q9JHK4 EC 2.5.1.60
AF127660 AAF65923 Q9JHK4 EC 2.5.1.60
AF127662 AAF65924 Q9JHK4 EC 2.5.1.60
BC012214 AAH12214 Q921J9  
AK002625 BAB22240 Q9JHK4 EC 2.5.1.60
AK146917 BAE27529 Q3UIH7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rabggta NP_062392 R.norvegicus Rabggta 58983   NP_113842 96
H.sapiens RABGGTA 5875 Gene Info NP_004572 91
D.melanogaster CG12007 40617   NP_649512 42
A.gambiae AgaP_AGAP009724 1279131   XP_318802 41
C.elegans M57.2 177113   NP_500367 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)